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PLM3_127_b2_sep16_scaffold_0

Search features with annotation key words

Displaying items 31-60 of 256 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_0_31
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31436..32098
DNA (663bp) protein (221aa)
hypothetical protein Tax=Streptomyces sp. PsTaAH-124 RepID=UPI000366BC54
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:EYR64995.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
phosphoribosyltransferase
PLM3_127_b2_sep16_scaffold_0_32
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

32165..33715
DNA (1551bp) protein (517aa)
Phosphoenolpyruvate carboxykinase Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TC29_HELMI
pckA; phosphoenolpyruvate carboxykinase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_127_b2_sep16_scaffold_0_33
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

33727..34881
DNA (1155bp) protein (385aa)
thiamine-monophosphate kinase (EC:2.7.4.16)
thiamine monophosphate kinase Tax=Frankia sp. BCU110501 RepID=UPI0003606F7F
Tax=GWC2_Nitrospirae_57_9_curated
PLM3_127_b2_sep16_scaffold_0_34
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(34915..35889)
DNA (975bp) protein (325aa)
hypothetical protein Tax=Arthrobacter sp. TB 23 RepID=UPI0002FCCB70
NAD(P)H quinone oxidoreductase, PIG3 family
NAD(P)H quinone oxidoreductase, PIG3 family {ECO:0000313|EMBL:AHG89549.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_0_35
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36119..37555
DNA (1437bp) protein (479aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
6-phosphogluconate dehydrogenase, decarboxylating Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y2G5_THEBD
6-phosphogluconate dehydrogenase
PLM3_127_b2_sep16_scaffold_0_36
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37702..39195
DNA (1494bp) protein (498aa)
NAD-dependent aldehyde dehydrogenase Tax=Saccharomonospora glauca K62 RepID=I1D7W8_9PSEU
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
aldehyde dehydrogenase
PLM3_127_b2_sep16_scaffold_0_37
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39395..40270
DNA (876bp) protein (292aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:AEH10973.1}; EC=2.7.4.7 {ECO:0000313|EMBL:AEH10973.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Phosphomethylpyrimidine kinase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B465_FRADG
PLM3_127_b2_sep16_scaffold_0_38
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

40274..40720
DNA (447bp) protein (149aa)
NUDIX hydrolase Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CEL8_KOSOT
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACR79264.1}; species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.1).;"
PLM3_127_b2_sep16_scaffold_0_39
unknown

Not on your lists

comp(40865..41173)
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Streptomyces scabies (strain 87.22) RepID=C9ZH23_STRSW
hypothetical protein
PLM3_127_b2_sep16_scaffold_0_40
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41348..41659
DNA (312bp) protein (104aa)
ArsR family transcriptional regulator Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HVI8_9PSEU
ArsR family transcriptional regulator {ECO:0000313|EMBL:EOD64366.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
ArsR family transcriptional regulator
PLM3_127_b2_sep16_scaffold_0_41
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41656..41949
DNA (294bp) protein (98aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00035D9B3B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK46735.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM3_127_b2_sep16_scaffold_0_42
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(42037..43131)
DNA (1095bp) protein (365aa)
Putative uncharacterized protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UT20_ROSS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ89773.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM3_127_b2_sep16_scaffold_0_43
unknown

Not on your lists

comp(43254..43478)
DNA (225bp) protein (75aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_0_44
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43475..44239)
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNL7_CHIPD
short-chain dehydrogenase/reductase SDR
Tax=GWA2_Gallionellales_60_142_curated
PLM3_127_b2_sep16_scaffold_0_45
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44277..45107)
DNA (831bp) protein (277aa)
Drug resistance transporter, EmrB/QacA subfamily Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B3Y0_FRADG
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:AEH09992.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM3_127_b2_sep16_scaffold_0_46
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45209..45673
DNA (465bp) protein (155aa)
Transcriptional regulator, HxlR family Tax=Streptomyces ipomoeae 91-03 RepID=L1KN46_9ACTO
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EKX61783.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
HxlR family transcriptional regulator
PLM3_127_b2_sep16_scaffold_0_47
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45900..46742
DNA (843bp) protein (281aa)
Uncharacterized protein Tax=Frankia sp. EUN1f RepID=D3D7F2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFC81145.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_0_48
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(46911..47570)
DNA (660bp) protein (220aa)
hypothetical protein Tax=Cohnella laeviribosi RepID=UPI00035E87AA
Uncharacterized protein {ECO:0000313|EMBL:CCF85694.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_0_49
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

47721..47951
DNA (231bp) protein (77aa)
CopG family DNA-binding protein bin=GWC2_Chloroflexi_73_18 species=Beutenbergia cavernae genus=Beutenbergia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_127_b2_sep16_scaffold_0_50
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

47951..48382
DNA (432bp) protein (144aa)
Probable ribonuclease VapC bin=GWC2_Chloroflexi_73_18 species=Mycobacterium sp. genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PIN domain-containing protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_127_b2_sep16_scaffold_0_51
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48432..49604)
DNA (1173bp) protein (391aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
Putative GTP cyclohydrolase 1 type 2 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RW0_SYMTH
hypothetical protein
PLM3_127_b2_sep16_scaffold_0_52
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49699..50370)
DNA (672bp) protein (224aa)
Bifunctional DNA primase/polymerase Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8RZ37_ACTS5
bifunctional DNA primase/polymerase
Bifunctional DNA primase/polymerase {ECO:0000313|EMBL:AEV82040.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM3_127_b2_sep16_scaffold_0_53
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50576..51946
DNA (1371bp) protein (457aa)
Uncharacterized protein Tax=Frankia sp. (strain EuI1c) RepID=E3J093_FRASU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP80376.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_127_b2_sep16_scaffold_0_54
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(52116..52307)
DNA (192bp) protein (64aa)
50S ribosomal protein L28 Tax=Frankia sp. CN3 RepID=G6HJB5_9ACTO
LSU ribosomal protein L28p
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_127_b2_sep16_scaffold_0_55
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

52442..54568
DNA (2127bp) protein (709aa)
RecG-like helicase Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D1C6_PELTS
RecG; ATP-dependent DNA helicase RecG
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3_127_b2_sep16_scaffold_0_56
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

54791..55624
DNA (834bp) protein (278aa)
Transcriptional regulator, TrmB Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B1V9_HERA2
transcriptional regulator TrmB
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ABX05401.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM3_127_b2_sep16_scaffold_0_57
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

55731..56657
DNA (927bp) protein (309aa)
hypothetical protein Tax=candidate division KSB1 RepID=UPI00036C722F
Transcriptional regulator, TrmB {ECO:0000313|EMBL:KKR78656.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
PLM3_127_b2_sep16_scaffold_0_58
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

57148..57720
DNA (573bp) protein (191aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI000365CA79
Methyltransferase {ECO:0000313|EMBL:KJV01293.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_0_59
actinobacterium acAMD-2, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

57808..58281
DNA (474bp) protein (158aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; species="Bacteria; Actinobacteria.;" source="actinobacterium acAMD-2.;"
phosphopantetheine adenylyltransferase (EC:2.7.7.3)
phosphopantetheine adenylyltransferase Tax=Saccharopolyspora erythraea RepID=UPI0001D31068
PLM3_127_b2_sep16_scaffold_0_60
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

58431..59024
DNA (594bp) protein (198aa)
Uncharacterized protein Tax=Frankia sp. EUN1f RepID=D3DBZ6_9ACTO
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying items 31-60 of 256 in total

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