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PLM3_127_b2_sep16_scaffold_0_54

Organism: PLM3_127_b2_sep16_Actinobacteridae_Actinomycetales_72_71

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(52116..52307)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 Tax=Frankia sp. CN3 RepID=G6HJB5_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 62.0
  • Bit_score: 100
  • Evalue 4.30e-19
LSU ribosomal protein L28p similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 61.0
  • Bit_score: 100
  • Evalue 1.60e-19
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 62.0
  • Bit_score: 100
  • Evalue 8.00e-19

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 192
ATGGCTGCCGTCTGCGACATCTGCGGCAAGCACCCGGGCTTCGGCATGTCGGTGAGCTTCTCCCACAAGCGCCACCCGCGCCGCTGGAACCCCAACATCCAGCGGATCAAGATCCTTGAGGGTCGCACGCCGCGGCGCAGGAACGTCTGCACGTCCTGCATCAAGGCCAACAAGGTGCGCCGCGCCGTCTAG
PROTEIN sequence
Length: 64
MAAVCDICGKHPGFGMSVSFSHKRHPRRWNPNIQRIKILEGRTPRRRNVCTSCIKANKVRRAV*