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PLM3_127_b2_sep16_scaffold_200

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_200_1
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(139..1722)
DNA (1584bp) protein (528aa)
Possible sodium/hydrogen antiporter Tax=Saccharopolyspora erythraea RepID=A4FJ25_SACEN
nha; sodium/hydrogen antiporter
Possible sodium/hydrogen antiporter {ECO:0000313|EMBL:CAM04050.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
PLM3_127_b2_sep16_scaffold_200_2
unknown

Not on your lists

1919..2074
DNA (156bp) protein (52aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_200_3
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2164..3624
DNA (1461bp) protein (487aa)
Major facilitator superfamily MFS_1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RQT0_BLASD
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CCG01607.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM3_127_b2_sep16_scaffold_200_4
unknown

Not on your lists

comp(3593..3688)
DNA (96bp) protein (32aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_200_5
actinobacterium acAMD-2, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3932..5443)
DNA (1512bp) protein (504aa)
Long-chain-fatty-acid--CoA ligase Tax=Cystobacter fuscus DSM 2262 RepID=S9PMP4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KGA10014.1}; species="Bacteria; Actinobacteria.;" source="actinobacterium acAMD-2.;"
AMP-dependent synthetase/ligase
PLM3_127_b2_sep16_scaffold_200_6
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5736..5948
DNA (213bp) protein (71aa)
Glutamine synthetase-like protein Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1G504_9PSEU
Glutamine synthetase
Glutamine synthetase-like protein {ECO:0000313|EMBL:EOD66548.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
PLM3_127_b2_sep16_scaffold_200_7
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

5945..6142
DNA (198bp) protein (66aa)
Glutamate-ammonia ligase Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K169_SACES
Glutamine synthetase
Glutamine synthetase {ECO:0000313|EMBL:AHY48034.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3_127_b2_sep16_scaffold_200_8
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

6157..6603
DNA (447bp) protein (149aa)
Short-chain dehydrogenase/reductase SDR Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AR80_RUBXD
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:AHY48031.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3_127_b2_sep16_scaffold_200_9
unknown

Not on your lists

comp(6700..6933)
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_200_10
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(7016..8281)
DNA (1266bp) protein (422aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI00036AB0BF
two-component sensor histidine kinase
PLM3_127_b2_sep16_scaffold_200_11
unknown

Not on your lists

8470..9090
DNA (621bp) protein (207aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_200_12
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9218..10303
DNA (1086bp) protein (362aa)
hypothetical protein Tax=Nocardiopsis xinjiangensis RepID=UPI00034C66C5
hypothetical protein
Coenzyme F420 biosynthesis-associated protein {ECO:0000313|EMBL:AKG43693.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
PLM3_127_b2_sep16_scaffold_200_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10317..11540
DNA (1224bp) protein (408aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00036AF9CD
mesJ; tRNA(Ile)-lysidine synthetase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_200_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

11647..12192
DNA (546bp) protein (182aa)
hpt; hypoxanthine-guanine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine-guanine phosphoribosyltransferase Tax=Modestobacter marinus (strain BC501) RepID=I4ES15_MODMB
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_127_b2_sep16_scaffold_200_15
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12500..14422
DNA (1923bp) protein (641aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
ATP-dependent zinc metalloprotease FtsH Tax=Frankia sp. CN3 RepID=G6HJ54_9ACTO
PLM3_127_b2_sep16_scaffold_200_16
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

14659..15309
DNA (651bp) protein (217aa)
GTP cyclohydrolase 1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PIV5_9ACTO
GTP cyclohydrolase I
Tax=BJP_08E140C01_Coriobacteriales_62_12
PLM3_127_b2_sep16_scaffold_200_17
GWC2_SYX_53_9_curated, Bacteria

Not on your lists

15532..16431
DNA (900bp) protein (300aa)
folP; dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase bin=GWC2_Nitrospirae-rel_56_14 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_SYX_53_9_curated
PLM3_127_b2_sep16_scaffold_200_18
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16428..16835
DNA (408bp) protein (136aa)
3-dehydroquinate dehydratase Tax=Streptomyces sp. CNT372 RepID=UPI0003750A7A
Kitasatospora griseola strain MF730-N6 RKJC_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ64138.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_200_19
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16832..17257
DNA (426bp) protein (142aa)
Dihydroneopterin aldolase {ECO:0000313|EMBL:EKF22076.1}; EC=4.1.2.25 {ECO:0000313|EMBL:EKF22076.1};; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium hassiacum DSM 44199.;"
Dihydroneopterin aldolase Tax=Mycobacterium hassiacum DSM 44199 RepID=K5BE75_9MYCO
dihydroneopterin aldolase
PLM3_127_b2_sep16_scaffold_200_20
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

17354..17848
DNA (495bp) protein (165aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3 4.1.2.25)
hypothetical protein Tax=Nocardiopsis xinjiangensis RepID=UPI00034718EC
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_127_b2_sep16_scaffold_200_21
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17849..18637
DNA (789bp) protein (263aa)
Methyltransferase type 11 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y9J0_THEBD
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADG88110.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM3_127_b2_sep16_scaffold_200_22
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18664..19617
DNA (954bp) protein (318aa)
NADP oxidoreductase coenzyme F420-dependent Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A530_THECD
NADP oxidoreductase coenzyme F420-dependent
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:ACZ00016.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_127_b2_sep16_scaffold_200_23
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

19592..20437
DNA (846bp) protein (282aa)
pantoate/beta-alanine ligase (EC:6.3.2.1)
pantoate--beta-alanine ligase Tax=Nocardiopsis lucentensis RepID=UPI0003476704
Tax=GWC2_Nitrospirae_57_9_curated
PLM3_127_b2_sep16_scaffold_200_24
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

20460..21275
DNA (816bp) protein (272aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036B04E7
transcriptional activator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_127_b2_sep16_scaffold_200_25
unknown

Not on your lists

21268..21900
DNA (633bp) protein (211aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_200_26
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

22413..23933
DNA (1521bp) protein (507aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase Tax=Ilumatobacter coccineus YM16-304 RepID=M5A385_9ACTN
Tax=BJP_08E140C01_Coriobacteriales_62_12
PLM3_127_b2_sep16_scaffold_200_27
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24179..26668
DNA (2490bp) protein (830aa)
ATPase AAA-2 domain protein Tax=Frankia sp. (strain EuI1c) RepID=E3J4S2_FRASU
ATPase AAA-2 domain protein {ECO:0000313|EMBL:ADP78241.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
ATPase AAA-2 domain-containing protein
PLM3_127_b2_sep16_scaffold_200_28
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists


26968..29478
DNA (2511bp) protein (837aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Leucine--tRNA ligase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CG69_THET1
leucyl-tRNA synthetase
PLM3_127_b2_sep16_scaffold_200_29
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

29696..30541
DNA (846bp) protein (282aa)
HhH-GPD family protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA17_SPHTD
HhH-GPD family protein
HhH-GPD family protein {ECO:0000313|EMBL:ACZ40660.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_127_b2_sep16_scaffold_200_30
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30629..32194
DNA (1566bp) protein (522aa)
Drug resistance transporter, EmrB/QacA subfamily Tax=Frankia sp. CN3 RepID=G6HGK2_9ACTO
transmembrane efflux protein
Putative transmembrane efflux protein {ECO:0000313|EMBL:CAJ61015.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
Displaying items 1-30 of 51 in total

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