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PLM3_127_b2_sep16_scaffold_200_35

Organism: PLM3_127_b2_sep16_Actinobacteridae_Actinomycetales_72_71

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 36606..37130

Top 3 Functional Annotations

Value Algorithm Source
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 156.0
  • Bit_score: 194
  • Evalue 1.30e-47
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 156.0
  • Bit_score: 194
  • Evalue 6.60e-47
Bifunctional enzyme IspD/IspF Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QDN5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 162.0
  • Bit_score: 186
  • Evalue 1.30e-44

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGCCGCCATTCCGGGTCGGCCAGGGGGTCGACGTGCACCCGCTCGTCACGGGGCGGCCGCTGGTGCTCGGCGGGGTCGCCGTCCCGTCCGACCGCGGCCTGGACGGCCACTCAGACGCCGACGTGGTCGCCCATGCCGTCTGCGACGCGGTGCTGAGCGCCGCCGGGCTTGGCGACCTCGGCCACCACTTCCCGGCCGGCGACCCCCGCTGGGCCGGCGCCGACAGCCTGGATCTCTGCCGCCGGGTGGCCGGGCTGGCCCGGGAGGCCGGCTGGGCGGTCGGGAACGTGGCCGCAACGGTCCTGTGCGACCGGCCCCGGCTCGGGCCGCACCTCCCGGCCATGGTCGAGGCGCTGGCCGGCGCCCTCGGGGTGGACGCCGGGCAGGTCCAGGTCACCCCCAAGTCGCCCGAGGGGCTGAGCTTTGCCGGCCGCGGCGAGGGCATCGCCGCCATCGCCGTCTCCCTGCTGGTCGCGGCCGACCCTCCCCCGGGGAGCGCCGGGCAACACCGGCGACAGGGTTAG
PROTEIN sequence
Length: 175
MPPFRVGQGVDVHPLVTGRPLVLGGVAVPSDRGLDGHSDADVVAHAVCDAVLSAAGLGDLGHHFPAGDPRWAGADSLDLCRRVAGLAREAGWAVGNVAATVLCDRPRLGPHLPAMVEALAGALGVDAGQVQVTPKSPEGLSFAGRGEGIAAIAVSLLVAADPPPGSAGQHRRQG*