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PLM3_60_coex_sep16_scaffold_1031_3

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 2559..3233

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 Tax=Frankia sp. CN3 RepID=G6HQ21_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 209.0
  • Bit_score: 191
  • Evalue 5.10e-46
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 216.0
  • Bit_score: 186
  • Evalue 2.30e-44
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 238.0
  • Bit_score: 182
  • Evalue 8.80e-44

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGTCCGAGTACAAGCTGGCCGCCGAGAACCGCGCGGACGCGGGGAAGGGCGCCGCCCGCCGCCTGCGGGCCGCCGGGCGAGTGCCCGCGGTGCTCTACGGGCACGGCTCCAAGCCGAAGTCCCTGAGCATCGACGCCCGCGAGCTCAGCCATGCCCTGCGGACCGACGCCGGCGCCAACGTGCTGCTGGAGCTCCAGGTCGGCCGCACCAAGCACCTGGCCCTCGCCAAGGAGATCCAGCGCCACCCGGTCAGGGGCACCTACACCCACATCGACTTCATCCTGGTGCGGCGCGGCGAGAAGGTCCACGTGGCCGTCCCCGTGCACCTGGTCGGGGAGGCGCCGGGGGTGCGCGAGGGCGGCATCGCCGACCAGGACCTGTACCAGGTCAGCGTCGAGGCCGAGGTGACCGCGGTGCCCGACGCGGTCGAGGCCGACATCTCCGGCCTGCGCATCGGCGACGTGCTGCGGGTCGCCGACCTCAAGGCACCGGCGGGCAGCACGATCCTGGACGACCCGGAGGCGTCGGTGGTGTCGGTCGTGCCGCCGGCGGTCGAGCCTGCCCCAGAGGAGGCCGAGGAGGCCGAGGCGGAGGCCGCCGAGGGCGAGGGGCCGGCCGAGGCCGAGGGCGAGGCGCCGGCCGAGGCCGGGGACGAGGGCCGGTCCGAGTCGTAG
PROTEIN sequence
Length: 225
MSEYKLAAENRADAGKGAARRLRAAGRVPAVLYGHGSKPKSLSIDARELSHALRTDAGANVLLELQVGRTKHLALAKEIQRHPVRGTYTHIDFILVRRGEKVHVAVPVHLVGEAPGVREGGIADQDLYQVSVEAEVTAVPDAVEADISGLRIGDVLRVADLKAPAGSTILDDPEASVVSVVPPAVEPAPEEAEEAEAEAAEGEGPAEAEGEAPAEAGDEGRSES*