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PLM3_60_coex_sep16_scaffold_1031

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1031_1
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(2..2302)
DNA (2301bp) protein (767aa)
Uncharacterized protein Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZT4_METCG
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3_60_coex_sep16_scaffold_1031_2
unknown

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2340..2477
DNA (138bp) protein (46aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1031_3
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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2559..3233
DNA (675bp) protein (225aa)
50S ribosomal protein L25 Tax=Frankia sp. CN3 RepID=G6HQ21_9ACTO
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
PLM3_60_coex_sep16_scaffold_1031_4
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3273..3851
DNA (579bp) protein (193aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
peptidyl-tRNA hydrolase Tax=Serinicoccus profundi RepID=UPI000255E61E
PLM3_60_coex_sep16_scaffold_1031_5
Kocuria palustris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3856..4782)
DNA (927bp) protein (309aa)
hypothetical protein Tax=Glaciibacter superstes RepID=UPI0003B48D48
LysR-family transcriptional regulator {ECO:0000313|EMBL:EME36220.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria palustris PEL.;"
LysR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_1031_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(4834..7350)
DNA (2517bp) protein (839aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8G6_SPHTD
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ACZ40109.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_60_coex_sep16_scaffold_1031_7
unknown

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8118..9413
DNA (1296bp) protein (432aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1031_8
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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9996..11279
DNA (1284bp) protein (428aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00035D5597
Beta-lactamase {ECO:0000313|EMBL:KJK50623.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
beta-lactamase
PLM3_60_coex_sep16_scaffold_1031_9
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11317..12612)
DNA (1296bp) protein (432aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036CD4B5
Uncharacterized protein {ECO:0000313|EMBL:CCH16193.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1031_10
unknown

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comp(13092..13442)
DNA (351bp) protein (117aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1031_11
unknown

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13547..13720
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1031_12
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13824..14453)
DNA (630bp) protein (210aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002D681BF
Putative WD-40 repeat protein {ECO:0000313|EMBL:ADI09513.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1031_13
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14611..14991
DNA (381bp) protein (127aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00036410C5
glyoxalase/bleomycin resistance protein/dioxygenase
Putative enzyme {ECO:0000313|EMBL:KFC61973.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
PLM3_60_coex_sep16_scaffold_1031_14
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

15063..16115
DNA (1053bp) protein (351aa)
L-threonine ammonia-lyase (EC:4.3.1.19); K01754 threonine dehydratase [EC:4.3.1.19] bin=bin8_Chloro species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
L-threonine ammonia-lyase (EC:4.3.1.19)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_60_coex_sep16_scaffold_1031_15
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16218..18146)
DNA (1929bp) protein (643aa)
Uncharacterized protein Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1G1N8_9PSEU
Endo-1,4-beta-glucanase {ECO:0000313|EMBL:CEL21925.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1031_16
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(18166..18759)
DNA (594bp) protein (198aa)
ATPase, BadF/BadG/BcrA/BcrD type Tax=Roseiflexus sp. (strain RS-1) RepID=A5V091_ROSS1
BadF/BadG/BcrA/BcrD type ATPase
ATPase, BadF/BadG/BcrA/BcrD type {ECO:0000313|EMBL:ABQ92294.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
Displaying 16 items

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