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PLM3_60_coex_sep16_scaffold_1031_4

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 3273..3851

Top 3 Functional Annotations

Value Algorithm Source
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 191.0
  • Bit_score: 206
  • Evalue 2.40e-50
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29) similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 188.0
  • Bit_score: 204
  • Evalue 1.80e-50
peptidyl-tRNA hydrolase Tax=Serinicoccus profundi RepID=UPI000255E61E similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 199.0
  • Bit_score: 208
  • Evalue 4.50e-51

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Taxonomy

Frankia sp. QA3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGGCCATGGACGGCGCTCCCTGGCTCGTCATCGGTCTGGGCAACCCCGACGACGAGTATGCCGGCACCCGGCACAACGCCGGGGCGATGGTGGTCGCCCGGCTGGCGGAGCGGGCGGGCGCCAAGCTGAAGCGGTCCCGCAACCGCGCGCAGGTGGCCGAGATCCGCGACGGCGACGAGCGCGTCGTGCTCGCCCGGCCGACCAGCTACGTCAACGAGTCGGGCGGGCCGGCCTCGCTGCTCGCCCGCTGGTACAAGACGCCGCTGGAGCGGATCATCGTCGTCCACGACGAGATCGACCTGGCCGCCGGCAAGCTTCAGATCCGCCGCGGCGGCGGCACGGCCGGCCACAACGGCGTGAAGGACATCGTCAAGGCGCTCGGCTCGCCGGAGTTCCTCCGTGTCCGCATCGGCGTCGGCCGCCCGCCCGGCCGCCAGGACCCGGCCGACTACGTCCTCGAGCCGGTTCCCAAGCGCCAGGCCGAGGACTTCGCCGTGCTCCTGGAGCGCGCCGCCGACGCCACCATGGACCTGGTGCACCTCCCCCTGGAACGGGCCCAGGACCGCCATAATCGCTAG
PROTEIN sequence
Length: 193
MAMDGAPWLVIGLGNPDDEYAGTRHNAGAMVVARLAERAGAKLKRSRNRAQVAEIRDGDERVVLARPTSYVNESGGPASLLARWYKTPLERIIVVHDEIDLAAGKLQIRRGGGTAGHNGVKDIVKALGSPEFLRVRIGVGRPPGRQDPADYVLEPVPKRQAEDFAVLLERAADATMDLVHLPLERAQDRHNR*