ggKbase home page

PLM3_60_coex_sep16_scaffold_1063_12

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(11252..12082)

Top 3 Functional Annotations

Value Algorithm Source
Mobile element protein Tax=Amycolatopsis azurea DSM 43854 RepID=M2QN33_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 273.0
  • Bit_score: 375
  • Evalue 2.30e-101
IS2 transposase TnpB {ECO:0000313|EMBL:CEA07380.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 276.0
  • Bit_score: 382
  • Evalue 4.60e-103
putative transposase similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 276.0
  • Bit_score: 375
  • Evalue 1.10e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Arthrobacter sp. 11W110_air → Arthrobacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGGCCGACCGGTCCAGCCGCCCCCACCACTCACCCCGCCGCACTCCGACGCCGGTGGTCCGCAAGATCGTGCACCTGCGCTGGACCCAGCGGCTCGGGCCAGCACAGATCGCCCCCCAGGTCGGGCTGGCCGCCTCGACCGTGCATGCCGTCTTGGTCCGCTGCCGCAGCAGCCGCCTGGCCCATCTGGACCGGACCACCGGCCAACCGATCCGCCGCTACGAGCACGACCATCCCGGCGACCTGGTCCATATCGATGTCAAGAAGCTGGGCAATATCCCCGCCGGGGGCGGCCACCGGTTCCTGGGCCGGGCCAGCGGGAAGCGGAACCGCTGGGCCGACCGGTCCAGCGGCCAGCGCAGCCGCCATCACGATCCGTTGATCGGCCATGGGTTCATCCACGCCGCGGTTGATGACCACTCCCGGCTGGCCTATGCCGAGATCCACCCTGATGAGACGCGGGAGACCGCGGCCGGGTTCTTGGCTCGAGCCCATGCCTGGTTCGCCGACCGCGGCCTGGTCATCCAGCGGGTGCTGACCGACAACGGCAGCTGCTACCGCAGCCACCGATGGCGCGACAGCTGCCAGCAGCTCGGGATCATCCACAAGCGGACCCGACCCTACCGGCCCCAGACCAATGGCAAGGTCGAGCGGTTCAACCGCACCCTGGTCGAGGGCTGGGCCTATCGGCGGCTGTATCGCAGCGAAGCGGCCCGCCGGGCCGCGTTCAGCCCCTGGCTGCACTGGTATAACCACCACCGGCCCCACACCGCACTCGGCGGTCGCCCACCCATCACCCGCTGCACCAACCTCCCCGAGCCTTACAGCTAG
PROTEIN sequence
Length: 277
MADRSSRPHHSPRRTPTPVVRKIVHLRWTQRLGPAQIAPQVGLAASTVHAVLVRCRSSRLAHLDRTTGQPIRRYEHDHPGDLVHIDVKKLGNIPAGGGHRFLGRASGKRNRWADRSSGQRSRHHDPLIGHGFIHAAVDDHSRLAYAEIHPDETRETAAGFLARAHAWFADRGLVIQRVLTDNGSCYRSHRWRDSCQQLGIIHKRTRPYRPQTNGKVERFNRTLVEGWAYRRLYRSEAARRAAFSPWLHWYNHHRPHTALGGRPPITRCTNLPEPYS*