ggKbase home page

PLM3_60_coex_sep16_scaffold_1063_13

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 12506..14245

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 578.0
  • Bit_score: 823
  • Evalue 9.60e-236
helicase Tax=Salinispora pacifica RepID=UPI000376332D similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 585.0
  • Bit_score: 833
  • Evalue 8.60e-239
recombinase D similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 578.0
  • Bit_score: 823
  • Evalue 1.90e-236

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinispora tropica → Salinispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1740
ATGCAGCAGACCCGCGCGGCGCCGCCGGCGACCGCCCTCGACGCCGTGCTGGAGCGCATCACCTACGCCAACGAGGAGACCGGCTACACCGTGGCCCGGGTCGCCACCGACCGGTCCAACGATCTTCTGACGGTGGTCGGTCCGCTGCTTGGGGCGCAGCCGGGCGAGAGCCTGCGGTTGCGGGGCCGCTGGCGCAGTCATCCGCAGTACGGCCGCCAGTTCGAGGTGGAGGCCTACCAGACGGTGCTGCCCGCCACCGTCCAGGGGATCCGCCGCTACCTCGGCTCGGGGCTGATCAAGGGGATTGGCCCGAAGATGGCCGAGCGGATCGTTGACCACTTCGGCGAGGCCACCCTGCAGGTGATCGAGCAGGCGCCAGCGCGGCTGGTCGAGGTGCCCGGCCTTGGTCCCAAGCGCACCGCGATGATCACCGCCGCTTGGGAGGAGCAGCGGGCCATCAAGGAGGTGATGGTCTTCCTGCAGGGGGTTGGGGTGTCGACCTCGCTTGGGGTGCGGATCTACAAGACCTACCAGGATCAAGCCATCGAGGTGGTCCAGCGGGAGCCGTACCGGCTGGCCGCCGACGTGTGGGGGATCGGCTTCAAGACCGCCGACCAGATCGCCCAGCGCCTGGGCATCCCCCATGACAGCCCCCAGCGGGTCAAGGCCGGCCTGCAGTTCGCGCTGTCGGAGGCAAGCGACGACGGCCACTGCTACCTGCCCGAGACCGAACTGGTCGCCAGCGCAACCGAGCTGCTTGGCGTCGACGCCGAGCTTGCCGGCCGCTGCCTGGAGGAATTGGCCGCTGAGGAGGGCGTGGTCGCCGAGCCGCTCCCCGCCACTGTGTCGCCGGGCGTCCCGGCGGGGACGGGGCGGGCCGTCTGGCTCGTGCCGTTCCATCGTGCCGAGACCGCCCTAGCCGCCGGGCTGCTGCGCCTGCTCCAGGCGCCCAGTGACCGGCTGCCCTGGTCCCAGGCGGTGGACTGGACGGTCGCGCTGGACTGGCTGGGCCGTACGATGGGCGTCACCCTGGCACCTGAGCAGGCGGCGGCGGTGCGGCTGGCCCTGAGCCAGCGGGTGGCGGTGCTGACCGGCGGGCCGGGCTGCGGCAAGAGCTACACGGTGCGCGCCATCGTTGCGCTGACCCTCGCCAAACACGCCAAGATCCTGTTGGCCGCGCCGACCGGTCGGGCCGCCAAGCGGCTGTCGGAGCTGGCCGGGCTGGAGGCGGCCACCCTGCATCGGCTGCTGCAGCTCCGCCCAGGTGGGGATGCGGCCTTTGATCGCGACCATCCGCTGGATGCCGACCTGGTGGTGGTCGATGAGGCTTCGATGCTGGACGTGCTGCTGGCCAACAAGCTGGTCAAGGCGGTCCCCTCCGGCGCCCACCTGCTGCTGGTCGGCGACGTCGACCAGCTCCCCAGCGTCGGGGCCGGGGAAGTGCTGCGCGACCTGCTGGCCGCCGAGCGGCTGCCCCGGGTGCGGCTGACCCACGTGTTCCGCCAGGCGCAGCGGAGCGGGGTGGTGACCAACGCTCATCGGATCAACGCCGGCCAGCCGCCGGTCACCCGCGGTCTGGACGACTTCTTCCTGTTCAGCGAGGACGACCCCGAGCGGGTCGCCGACCTGGTCGTGGACATTGTGGCCAACCGGCTGCCGCGCCGGTTCGGGCTCGACCCGGCTCGGGAGGTGCAGGTGCTGTGCCCGATGCACCGTGGGCCGGCCGGGCGGGTGTGCTGA
PROTEIN sequence
Length: 580
MQQTRAAPPATALDAVLERITYANEETGYTVARVATDRSNDLLTVVGPLLGAQPGESLRLRGRWRSHPQYGRQFEVEAYQTVLPATVQGIRRYLGSGLIKGIGPKMAERIVDHFGEATLQVIEQAPARLVEVPGLGPKRTAMITAAWEEQRAIKEVMVFLQGVGVSTSLGVRIYKTYQDQAIEVVQREPYRLAADVWGIGFKTADQIAQRLGIPHDSPQRVKAGLQFALSEASDDGHCYLPETELVASATELLGVDAELAGRCLEELAAEEGVVAEPLPATVSPGVPAGTGRAVWLVPFHRAETALAAGLLRLLQAPSDRLPWSQAVDWTVALDWLGRTMGVTLAPEQAAAVRLALSQRVAVLTGGPGCGKSYTVRAIVALTLAKHAKILLAAPTGRAAKRLSELAGLEAATLHRLLQLRPGGDAAFDRDHPLDADLVVVDEASMLDVLLANKLVKAVPSGAHLLLVGDVDQLPSVGAGEVLRDLLAAERLPRVRLTHVFRQAQRSGVVTNAHRINAGQPPVTRGLDDFFLFSEDDPERVADLVVDIVANRLPRRFGLDPAREVQVLCPMHRGPAGRVC*