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PLM3_5_b1_sep16_scaffold_4434

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_5_b1_sep16_scaffold_4434_1
unknown

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comp(2..214)
DNA (213bp) protein (71aa)

This feature has no annotations

PLM3_5_b1_sep16_scaffold_4434_2
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(491..3583)
DNA (3093bp) protein (1031aa)
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
DNA polymerase III, alpha subunit Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTR7_ACIC1
PLM3_5_b1_sep16_scaffold_4434_3
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(3767..4438)
DNA (672bp) protein (224aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2N3V5_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX05088.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM3_5_b1_sep16_scaffold_4434_4
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4428..5087)
DNA (660bp) protein (220aa)
hypothetical protein Tax=Streptomyces sulphureus RepID=UPI0002E737ED
Uncharacterized protein {ECO:0000313|EMBL:KEI43563.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
hypothetical protein
PLM3_5_b1_sep16_scaffold_4434_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5232..6149)
DNA (918bp) protein (306aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Pseudouridine synthase Tax=Oscillibacter sp. CAG:241 RepID=R6GHL9_9FIRM
RluA family pseudouridine synthase
PLM3_5_b1_sep16_scaffold_4434_6
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6146..6433)
DNA (288bp) protein (96aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Lipoprotein signal peptidase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AXM4_FRADG
lipoprotein signal peptidase
Displaying 6 items

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