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PLM3_30_b1_sep16_Alphaproteobacteria_Rhizobiales_66_8

PLM3_30cm_b1_sep2016_Rhizobiales_66_8
In projects: PLM3_30cm_b1_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 451-500 of 743 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3_30_b1_sep16_scaffold_26310
Phylum: Proteobacteria (60%)
5 2762 bp 65.93 8.36 79.40
PLM3_30_b1_sep16_scaffold_3065
Class: Alphaproteobacteria (52.38%)
21 15788 bp 65.96 8.37 89.63
PLM3_30_b1_sep16_scaffold_17747
Order: Rhizobiales (60%)
5 5390 bp 63.99 8.38 88.05
PLM3_30_b1_sep16_scaffold_21686
Species: bacterium YEK0313 (50%)
4 5085 bp 65.68 8.38 88.85
PLM3_30_b1_sep16_scaffold_9747
Domain: Bacteria (60%)
10 4777 bp 66.17 8.38 83.21
PLM3_30_b1_sep16_scaffold_4804
Order: Rhizobiales (71.43%)
7 6848 bp 66.30 8.39 93.97
PLM3_30_b1_sep16_scaffold_6403
Order: Rhizobiales (77.78%)
9 7957 bp 65.18 8.39 86.34
PLM3_30_b1_sep16_scaffold_45498
Species: Bradyrhizobium japonicum (50%)
2 2609 bp 66.12 8.39 95.32
PLM3_30_b1_sep16_scaffold_14303
Species: Rhodovulum sp. PH10 (80%)
5 5093 bp 68.27 8.39 89.83
PLM3_30_b1_sep16_scaffold_57616
Order: Rhizobiales (75%)
4 3023 bp 64.77 8.39 90.31
PLM3_30_b1_sep16_scaffold_5549
Order: Rhizobiales (80%)
10 6856 bp 66.06 8.40 90.10
PLM3_30_b1_sep16_scaffold_24515
Class: Alphaproteobacteria (60%)
5 3405 bp 66.40 8.41 89.07
PLM3_30_b1_sep16_scaffold_2157
Order: Rhizobiales (63.64%)
11 13217 bp 64.11 8.41 94.02
PLM3_30_b1_sep16_scaffold_21861
Order: Rhizobiales (60%)
5 5193 bp 66.32 8.41 87.70
PLM3_30_b1_sep16_scaffold_7417
Species: RLO_Betaproteobacteria_65_14 (60%)
5 5512 bp 66.42 8.41 93.07
PLM3_30_b1_sep16_scaffold_54080
Class: Alphaproteobacteria (60%)
5 3015 bp 64.18 8.41 82.09
PLM3_30_b1_sep16_scaffold_4351
Class: Alphaproteobacteria (50%)
12 11360 bp 66.20 8.42 96.95
PLM3_30_b1_sep16_scaffold_4166
Order: Rhizobiales (61.11%)
18 14701 bp 66.39 8.42 89.50
PLM3_30_b1_sep16_scaffold_49365
Class: Alphaproteobacteria (66.67%)
6 4367 bp 64.78 8.42 90.82
PLM3_30_b1_sep16_scaffold_6997
Phylum: Proteobacteria (71.43%)
7 5684 bp 65.75 8.42 93.63
PLM3_30_b1_sep16_scaffold_14085
Order: Rhizobiales (66.67%)
3 3914 bp 65.51 8.43 92.05
PLM3_30_b1_sep16_scaffold_7769
Order: Rhizobiales (50%)
14 14256 bp 66.48 8.44 95.48
PLM3_30_b1_sep16_scaffold_5657
Phylum: Proteobacteria (54.55%)
11 10733 bp 65.16 8.44 97.63
PLM3_30_b1_sep16_scaffold_18273
Order: Rhizobiales (60%)
5 3378 bp 63.82 8.44 65.16
PLM3_30_b1_sep16_scaffold_12290
Species: bacterium YEK0313 (75%)
4 4218 bp 66.33 8.46 77.17
PLM3_30_b1_sep16_scaffold_17385
Class: Alphaproteobacteria (50%)
6 3476 bp 64.07 8.46 92.43
PLM3_30_b1_sep16_scaffold_5370
Class: Alphaproteobacteria (62.5%)
16 9969 bp 64.14 8.47 90.13
PLM3_30_b1_sep16_scaffold_17118
Genus: Bradyrhizobium (75%)
4 3508 bp 66.33 8.47 95.44
PLM3_30_b1_sep16_scaffold_9963
Order: Rhizobiales (55.56%)
9 7068 bp 66.31 8.47 94.19
PLM3_30_b1_sep16_scaffold_17016
Phylum: Proteobacteria (100%)
3 3518 bp 63.93 8.48 85.45
PLM3_30_b1_sep16_scaffold_9398
Phylum: Proteobacteria (63.64%)
11 10100 bp 65.97 8.48 98.32
PLM3_30_b1_sep16_scaffold_36346
Species: Rhodovulum sp. PH10 (50%)
4 3059 bp 66.39 8.48 73.06
PLM3_30_b1_sep16_scaffold_6545
Order: Rhizobiales (60%)
5 5880 bp 63.96 8.49 95.92
PLM3_30_b1_sep16_scaffold_23398
Phylum: Proteobacteria (60%)
5 3429 bp 68.15 8.49 77.95
PLM3_30_b1_sep16_scaffold_9366
Class: Alphaproteobacteria (55.56%)
9 4890 bp 66.50 8.50 91.23
PLM3_30_b1_sep16_scaffold_12408
Order: Rhizobiales (66.67%)
9 12861 bp 67.13 8.50 86.24
PLM3_30_b1_sep16_scaffold_2414
Order: Rhizobiales (54.55%)
11 9500 bp 65.80 8.51 91.29
PLM3_30_b1_sep16_scaffold_15434
Species: Rhodovulum sp. PH10 (66.67%)
3 3717 bp 65.48 8.51 83.70
PLM3_30_b1_sep16_scaffold_3707
Order: Rhizobiales (70.59%)
17 13818 bp 67.48 8.51 90.66
PLM3_30_b1_sep16_scaffold_16899
Species: Rhodovulum sp. PH10 (50%)
4 4213 bp 63.76 8.51 85.38
PLM3_30_b1_sep16_scaffold_3981
Class: Alphaproteobacteria (66.67%)
9 11406 bp 65.82 8.51 90.66
PLM3_30_b1_sep16_scaffold_1898
Order: Rhizobiales (52.94%)
17 16610 bp 66.93 8.52 89.89
PLM3_30_b1_sep16_scaffold_6565
Order: Rhizobiales (66.67%)
9 7790 bp 66.42 8.53 93.58
PLM3_30_b1_sep16_scaffold_673
Order: Rhizobiales (55.56%)
18 17413 bp 64.34 8.53 88.40
PLM3_30_b1_sep16_scaffold_19404
Order: Rhizobiales (57.14%)
7 6134 bp 68.36 8.53 96.05
PLM3_30_b1_sep16_scaffold_5159
Class: Alphaproteobacteria (66.67%)
12 6632 bp 65.20 8.53 85.55
PLM3_30_b1_sep16_scaffold_4060
Order: Rhizobiales (87.5%)
8 9437 bp 64.73 8.54 95.56
PLM3_30_b1_sep16_scaffold_5193
Order: Rhizobiales (77.78%)
9 8243 bp 68.03 8.55 91.46
PLM3_30_b1_sep16_scaffold_10981
Order: Rhizobiales (50%)
8 9280 bp 65.41 8.55 81.21
PLM3_30_b1_sep16_scaffold_5831
Order: Rhizobiales (62.5%)
8 6819 bp 64.99 8.56 85.09
Displaying items 451-500 of 743 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.