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PLM3_30_b2_sep16_scaffold_86

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_86_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

1..1305
DNA (1305bp) protein (435aa)
RNA polymerase sigma factor SigA Tax=Frankia RepID=Q6TE13_9ACTO
RpoD subfamily RNA polymerase sigma-70 subunit
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_86_2
unknown

Not on your lists

comp(1331..1591)
DNA (261bp) protein (87aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_86_trna_1
unknown

Not on your lists

1642..1714
DNA (73bp)
transferRNA Asn
PLM3_30_b2_sep16_scaffold_86_3
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1900..2493)
DNA (594bp) protein (198aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000360AC62
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM17017.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
PLM3_30_b2_sep16_scaffold_86_4
unknown

Not on your lists

comp(2526..2702)
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_86_5
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2753..3175)
DNA (423bp) protein (141aa)
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037C039F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW10867.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_30_b2_sep16_scaffold_86_6
unknown

Not on your lists

comp(3304..3795)
DNA (492bp) protein (164aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_86_7
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4484..5128)
DNA (645bp) protein (215aa)
phosphoesterase Tax=Frankia sp. Iso899 RepID=UPI0003B7B7F8
Phosphoesterase {ECO:0000313|EMBL:EWT01925.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
putative phosphatase
PLM3_30_b2_sep16_scaffold_86_8
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5142..7952)
DNA (2811bp) protein (937aa)
ATP-dependent transcriptional regulator, MalT-like, LuxR family Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y2E8_THEBD
LuxR family ATP-dependent transcriptional regulator
ATP-dependent transcriptional regulator, MalT-like, LuxR family {ECO:0000313|EMBL:ADG88797.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM3_30_b2_sep16_scaffold_86_9
unknown

Not on your lists

8033..8269
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_86_10
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8489..9700
DNA (1212bp) protein (404aa)
Uncharacterized protein Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z3J0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM63152.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_86_11
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9856..10887
DNA (1032bp) protein (344aa)
Uncharacterized protein Tax=Frankia alni (strain ACN14a) RepID=Q0RTT9_FRAAA
Putative integral membrane protein {ECO:0000313|EMBL:KJE19774.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_86_12
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11115..12989
DNA (1875bp) protein (625aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003648EDE
Glucoamylase {ECO:0000313|EMBL:KHD75396.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
glycoside hydrolase 15-like protein
PLM3_30_b2_sep16_scaffold_86_13
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13231..14031)
DNA (801bp) protein (267aa)
Diacylglycerol kinase catalytic region Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBF4_CONWI
Diacylglycerol kinase {ECO:0000313|EMBL:EWT01956.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
diacylglycerol kinase
PLM3_30_b2_sep16_scaffold_86_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(14255..14725)
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LS78_ACIC1
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_86_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

14835..15269
DNA (435bp) protein (145aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_86_16
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

15535..15930
DNA (396bp) protein (132aa)
Transcriptional regulator, Rrf2 family Tax=Desulfococcus multivorans DSM 2059 RepID=S7TVG4_DESML
signal transduction protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3_30_b2_sep16_scaffold_86_17
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16368..17096
DNA (729bp) protein (243aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VZX9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00409.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM3_30_b2_sep16_scaffold_86_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

17322..17714
DNA (393bp) protein (131aa)
hypothetical protein Tax=Dehalobacter sp. FTH1 RepID=UPI00036E4019
GCN5-related N-acetyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_30_b2_sep16_scaffold_86_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

17678..17890
DNA (213bp) protein (71aa)
GCN5 family acetyltransferase Tax=Curtobacterium sp. B8 RepID=UPI000346D5F2
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_30_b2_sep16_scaffold_86_20
unknown

Not on your lists

17948..18349
DNA (402bp) protein (134aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_86_21
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(18514..19128)
DNA (615bp) protein (205aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00036D82E2
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:EFH85433.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
bifunctional deaminase-reductase domain-containing protein
PLM3_30_b2_sep16_scaffold_86_22
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19651..20199
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SCK8_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL79543.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM3_30_b2_sep16_scaffold_86_23
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20196..20882
DNA (687bp) protein (229aa)
Uncharacterized protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SCK9_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL79544.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM3_30_b2_sep16_scaffold_86_24
unknown

Not on your lists

20932..21345
DNA (414bp) protein (138aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_86_25
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22000..22413
DNA (414bp) protein (138aa)
Alcohol dehydrogenase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AY90_STRRD
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:ACZ87100.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_30_b2_sep16_scaffold_86_26
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22540..23097)
DNA (558bp) protein (186aa)
deaminase reductase Tax=Frankia sp. BCU110501 RepID=UPI00035E5F69
deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ABW15159.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_30_b2_sep16_scaffold_86_27
unknown

Not on your lists

23323..23544
DNA (222bp) protein (74aa)

This feature has no annotations

Displaying 28 items

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