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PLM6_170_b1_sep16_Chloroflexi_64_6

PLM3-1_170cm_b1_sep2016_Bacteria_64_6
In projects: PLM3-1_170cm_b1_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Bacteria

Displaying items 151-200 of 501 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3-1_170_b1_sep16_scaffold_31739
Domain: Bacteria (50%)
4 2429 bp 65.95 6.36 91.64
PLM3-1_170_b1_sep16_scaffold_13485 4 3919 bp 62.75 7.73 91.63
PLM3-1_170_b1_sep16_scaffold_49994
Phylum: Actinobacteria (50%)
4 2469 bp 66.14 4.37 91.62
PLM3-1_170_b1_sep16_scaffold_6905
Domain: Bacteria (67.74%)
31 23411 bp 63.47 5.88 91.61
PLM3-1_170_b1_sep16_scaffold_12163
Species: RBG_16_Chloroflexi_64_32_curated (50%)
6 6705 bp 63.33 5.88 91.45
PLM3-1_170_b1_sep16_scaffold_1440
Domain: Bacteria (84.21%)
19 23670 bp 62.83 6.86 91.44
PLM3-1_170_b1_sep16_scaffold_37101
Domain: Bacteria (50%)
6 3625 bp 63.70 5.46 91.37
PLM3-1_170_b1_sep16_scaffold_2795
Phylum: Chloroflexi (53.85%)
13 12651 bp 64.30 6.20 91.34
PLM3-1_170_b1_sep16_scaffold_35523
Class: Actinobacteria (60%)
5 3870 bp 66.28 5.70 91.32
PLM3-1_170_b1_sep16_scaffold_22924
Species: RBG_16_Chloroflexi_68_14_curated (66.67%)
3 2914 bp 63.25 5.46 91.32
PLM3-1_170_b1_sep16_scaffold_20920
Species: marine sediment metagenome (100%)
3 4721 bp 60.11 6.16 91.32
PLM3-1_170_b1_sep16_scaffold_126143
Species: Candidatus Entotheonella sp. TSY2 (50%)
2 2233 bp 64.80 4.16 91.22
PLM3-1_170_b1_sep16_scaffold_42060
Species: marine sediment metagenome (55.56%)
9 5936 bp 64.72 6.12 91.17
PLM3-1_170_b1_sep16_scaffold_20908
Species: RBG_16_Chloroflexi_64_32_curated (100%)
3 3074 bp 63.14 6.00 91.15
PLM3-1_170_b1_sep16_scaffold_35416
Domain: Bacteria (66.67%)
6 4758 bp 65.74 5.36 91.11
PLM3-1_170_b1_sep16_scaffold_29727
Phylum: Proteobacteria (57.14%)
7 4470 bp 65.70 9.87 91.07
PLM3-1_170_b1_sep16_scaffold_22999
Domain: Bacteria (57.14%)
7 2909 bp 65.45 5.52 91.06
PLM3-1_170_b1_sep16_scaffold_16163
Species: RBG_16_Chloroflexi_68_14_curated (50%)
6 5216 bp 65.22 6.18 91.05
PLM3-1_170_b1_sep16_scaffold_72960
Domain: Bacteria (66.67%)
3 2432 bp 64.56 5.86 91.04
PLM3-1_170_b1_sep16_scaffold_41112
Phylum: Chloroflexi (60%)
5 3270 bp 65.20 6.06 91.01
PLM3-1_170_b1_sep16_scaffold_19581
Domain: Bacteria (71.43%)
7 7908 bp 64.26 5.84 90.97
PLM3-1_170_b1_sep16_scaffold_7059
Species: RBG_16_Chloroflexi_64_32_curated (54.55%)
11 10280 bp 65.69 5.95 90.90
PLM3-1_170_b1_sep16_scaffold_14592
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (66.67%)
3 3756 bp 61.50 10.06 90.89
PLM3-1_170_b1_sep16_scaffold_7285
Domain: Bacteria (66.67%)
15 10589 bp 64.16 6.03 90.89
PLM3-1_170_b1_sep16_scaffold_44284
Species: BJP_IG2069_Desfulfarculales_53_13 (50%)
2 2004 bp 61.48 7.11 90.87
PLM3-1_170_b1_sep16_scaffold_4884
Domain: Bacteria (61.9%)
21 17024 bp 63.43 5.94 90.82
PLM3-1_170_b1_sep16_scaffold_38843
Species: marine sediment metagenome (50%)
2 2164 bp 64.93 6.17 90.80
PLM3-1_170_b1_sep16_scaffold_3976
Species: RBG_16_Chloroflexi_68_14_curated (50%)
8 7934 bp 63.70 6.90 90.79
PLM3-1_170_b1_sep16_scaffold_50593
Domain: Bacteria (57.14%)
7 4277 bp 65.84 5.23 90.76
PLM3-1_170_b1_sep16_scaffold_6170
Species: RBG_16_Chloroflexi_64_32_curated (62.5%)
8 5968 bp 64.95 5.20 90.73
PLM3-1_170_b1_sep16_scaffold_34716
Domain: Bacteria (80%)
5 2308 bp 62.78 7.28 90.73
PLM3-1_170_b1_sep16_scaffold_32058
Domain: Bacteria (66.67%)
3 2416 bp 65.27 5.71 90.65
PLM3-1_170_b1_sep16_scaffold_4757
Domain: Bacteria (83.33%)
12 8568 bp 64.24 6.32 90.62
PLM3-1_170_b1_sep16_scaffold_28685
Species: RBG_16_RIF_CHLX_72_14_curated (50%)
4 2573 bp 67.08 7.23 90.59
PLM3-1_170_b1_sep16_scaffold_35479
Domain: Bacteria (50%)
4 2280 bp 67.37 5.00 90.53
PLM3-1_170_b1_sep16_scaffold_15480
Species: RBG_16_Chloroflexi_64_32_curated (50%)
10 9316 bp 64.66 5.55 90.46
PLM3-1_170_b1_sep16_scaffold_14279 10 7724 bp 64.32 6.62 90.42
PLM3-1_170_b1_sep16_scaffold_7690 19 11729 bp 63.48 5.42 90.39
PLM3-1_170_b1_sep16_scaffold_30710
Species: RBG_16_Chloroflexi_68_14_curated (100%)
2 2476 bp 65.51 4.73 90.39
PLM3-1_170_b1_sep16_scaffold_383
Phylum: Actinobacteria (55.17%)
29 21910 bp 61.97 9.56 90.37
PLM3-1_170_b1_sep16_scaffold_21603
Domain: Bacteria (80%)
5 3017 bp 63.90 5.32 90.29
PLM3-1_170_b1_sep16_scaffold_11078
Domain: Bacteria (62.5%)
8 6564 bp 64.32 6.54 90.22
PLM3-1_170_b1_sep16_scaffold_33109
Phylum: Chloroflexi (60%)
5 3166 bp 61.62 6.25 90.21
PLM3-1_170_b1_sep16_scaffold_11681
Domain: Bacteria (60%)
5 7114 bp 63.86 5.88 90.20
PLM3-1_170_b1_sep16_scaffold_3741
Phylum: Chloroflexi (50%)
18 14219 bp 64.36 6.23 90.15
PLM3-1_170_b1_sep16_scaffold_16812
Domain: Bacteria (100%)
5 6078 bp 64.96 5.92 90.13
PLM3-1_170_b1_sep16_scaffold_64973
Domain: Bacteria (50%)
4 2317 bp 62.11 5.83 90.12
PLM3-1_170_b1_sep16_scaffold_25187 5 2768 bp 62.97 5.69 90.10
PLM3-1_170_b1_sep16_scaffold_4786
Phylum: Chloroflexi (58.33%)
12 12326 bp 64.55 6.19 90.00
PLM3-1_170_b1_sep16_scaffold_6153
Phylum: Chloroflexi (75%)
20 18792 bp 65.36 6.83 89.97
Displaying items 151-200 of 501 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.