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PLM3_127_b2_sep16_Rokubacteria_69_9

PLM3_127cm_b2_sep2016_Bacteria_69_9
In projects: PLM3_127cm_b2_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Bacteria

Displaying items 101-150 of 522 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3_127_b2_sep16_scaffold_20500
Domain: Bacteria (77.78%)
9 5862 bp 66.26 6.37 83.21
PLM3_127_b2_sep16_scaffold_6443
Domain: Bacteria (87.5%)
16 13601 bp 66.92 8.50 83.42
PLM3_127_b2_sep16_scaffold_2209
Domain: Bacteria (64.71%)
17 16366 bp 68.20 8.66 83.44
PLM3_127_b2_sep16_scaffold_28507
Order: Rhizobiales (66.67%)
3 3128 bp 65.82 5.04 83.63
PLM3_127_b2_sep16_scaffold_16299
Domain: Bacteria (87.5%)
8 5895 bp 69.08 9.47 83.77
PLM3_127_b2_sep16_scaffold_12521
Phylum: Proteobacteria (83.33%)
6 6135 bp 69.88 8.44 83.91
PLM3_127_b2_sep16_scaffold_20176
Domain: Bacteria (100%)
8 7649 bp 68.00 9.00 83.97
PLM3_127_b2_sep16_scaffold_10438
Domain: Bacteria (100%)
6 5580 bp 68.17 9.52 83.98
PLM3_127_b2_sep16_scaffold_1356
Phylum: Rokubacteria (54.55%)
22 18228 bp 67.31 8.20 84.00
PLM3_127_b2_sep16_scaffold_13007
Species: RBG_16_Elusimicrobia_66_12_curated (50%)
6 5466 bp 68.06 11.96 84.14
PLM3_127_b2_sep16_scaffold_16401
Phylum: Rokubacteria (66.67%)
3 4300 bp 66.84 8.55 84.21
PLM3_127_b2_sep16_scaffold_7094
Domain: Bacteria (88.89%)
9 6952 bp 68.77 10.42 84.32
PLM3_127_b2_sep16_scaffold_15843
Domain: Bacteria (71.43%)
7 5800 bp 69.48 7.99 84.52
PLM3_127_b2_sep16_scaffold_16160
Domain: Bacteria (80%)
5 6181 bp 70.44 6.53 84.55
PLM3_127_b2_sep16_scaffold_171510
Species: marine sediment metagenome (50%)
6 3469 bp 66.22 4.97 84.58
PLM3_127_b2_sep16_scaffold_31148
Domain: Bacteria (77.78%)
9 9250 bp 68.16 8.09 84.94
PLM3_127_b2_sep16_scaffold_6716
Domain: Bacteria (85.71%)
14 11023 bp 69.62 9.01 84.94
PLM3_127_b2_sep16_scaffold_2788
Phylum: Rokubacteria (85%)
20 16141 bp 68.90 8.56 85.01
PLM3_127_b2_sep16_scaffold_15321
Phylum: Proteobacteria (50%)
4 4477 bp 68.86 11.06 85.03
PLM3_127_b2_sep16_scaffold_18750
Class: Deltaproteobacteria (50%)
6 3978 bp 69.88 7.65 85.07
PLM3_127_b2_sep16_scaffold_11210
Domain: Bacteria (100%)
5 8329 bp 70.21 7.19 85.11
PLM3_127_b2_sep16_scaffold_24608
Genus: Myxococcus (66.67%)
3 3399 bp 69.87 4.68 85.17
PLM3_127_b2_sep16_scaffold_25797
Domain: Bacteria (90.91%)
11 8504 bp 70.56 6.09 85.23
PLM3_127_b2_sep16_scaffold_6710
Phylum: Proteobacteria (76.47%)
17 16358 bp 69.81 10.18 85.24
PLM3_127_b2_sep16_scaffold_12443
Domain: Bacteria (90%)
10 6915 bp 69.01 8.07 85.25
PLM3_127_b2_sep16_scaffold_6871
Domain: Bacteria (88.89%)
9 7926 bp 68.75 8.74 85.28
PLM3_127_b2_sep16_scaffold_21207
Phylum: Rokubacteria (80%)
5 3707 bp 70.03 8.21 85.30
PLM3_127_b2_sep16_scaffold_2445
Phylum: Proteobacteria (72.73%)
11 12666 bp 69.05 8.99 85.32
PLM3_127_b2_sep16_scaffold_2857
Domain: Bacteria (80%)
20 14147 bp 68.47 8.58 85.42
PLM3_127_b2_sep16_scaffold_1280
Domain: Bacteria (81.82%)
22 21678 bp 70.26 9.31 85.51
PLM3_127_b2_sep16_scaffold_2676
Phylum: Rokubacteria (66.67%)
42 31193 bp 67.97 8.40 85.77
PLM3_127_b2_sep16_scaffold_5573
Phylum: Rokubacteria (50%)
8 8824 bp 67.29 8.19 85.85
PLM3_127_b2_sep16_scaffold_6391
Species: Candidatus Entotheonella sp. TSY1 (50%)
6 7352 bp 68.05 8.55 85.85
PLM3_127_b2_sep16_scaffold_1939
Domain: Bacteria (75%)
16 15371 bp 68.97 8.43 85.86
PLM3_127_b2_sep16_scaffold_3515
Species: R_Rokubacteria_73_56 (55.56%)
18 14500 bp 67.37 8.34 85.86
PLM3_127_b2_sep16_scaffold_7152
Phylum: Rokubacteria (60%)
10 9707 bp 68.86 9.32 86.04
PLM3_127_b2_sep16_scaffold_13034
Phylum: Rokubacteria (62.5%)
8 4902 bp 69.87 8.05 86.05
PLM3_127_b2_sep16_scaffold_8894
Domain: Bacteria (66.67%)
12 9978 bp 68.92 7.65 86.05
PLM3_127_b2_sep16_scaffold_18973
Domain: Bacteria (100%)
5 3954 bp 71.70 9.83 86.19
PLM3_127_b2_sep16_scaffold_30405
Domain: Bacteria (100%)
3 3014 bp 66.03 5.03 86.20
PLM3_127_b2_sep16_scaffold_36029
Domain: Bacteria (100%)
5 4311 bp 67.90 7.31 86.22
PLM3_127_b2_sep16_scaffold_22381
Domain: Bacteria (83.33%)
6 3593 bp 68.41 6.55 86.25
PLM3_127_b2_sep16_scaffold_4497
Phylum: Proteobacteria (50%)
8 8958 bp 68.66 7.69 86.27
PLM3_127_b2_sep16_scaffold_5903
Genus: Candidatus Entotheonella (66.67%)
6 7687 bp 68.99 9.27 86.33
PLM3_127_b2_sep16_scaffold_30076
Phylum: Proteobacteria (75%)
4 3557 bp 69.36 10.12 86.36
PLM3_127_b2_sep16_scaffold_5521
Phylum: Proteobacteria (50%)
12 11863 bp 69.87 8.91 86.39
PLM3_127_b2_sep16_scaffold_11587
Domain: Bacteria (83.33%)
6 6188 bp 70.51 10.62 86.44
PLM3_127_b2_sep16_scaffold_36125
Phylum: Rokubacteria (75%)
4 3490 bp 70.09 5.85 86.48
PLM3_127_b2_sep16_scaffold_22411
Phylum: Proteobacteria (60%)
5 4672 bp 68.13 7.42 86.49
PLM3_127_b2_sep16_scaffold_5621
Domain: Bacteria (85.71%)
14 17005 bp 69.71 8.59 86.52
Displaying items 101-150 of 522 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.