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PLM1_100_coex_sep16_Rokubacteria_71_11

PLM1_100cm_coex_sep2016_Rokubacteria_71_11
In projects: PLM1_100cm_coex_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  rokubacteria_ggkbase

Consensus taxonomy: Rokubacteria  →  Bacteria

Displaying items 101-150 of 679 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM1_100_coex_sep16_scaffold_18956
Species: Candidatus Entotheonella sp. TSY1 (50%)
2 2636 bp 72.23 11.38 98.56
PLM1_100_coex_sep16_scaffold_10580
Species: RBG_16_Betaproteobacteria_66_20_curated (60%)
5 3664 bp 68.23 10.28 98.50
PLM1_100_coex_sep16_scaffold_977
Species: R_Rokubacteria_73_56 (50%)
8 7760 bp 71.29 12.22 98.43
PLM1_100_coex_sep16_scaffold_3545
Species: GWA2_Rokubacteria_73_35_curated (50%)
4 3874 bp 68.77 12.89 98.43
PLM1_100_coex_sep16_scaffold_2626
Domain: Bacteria (70%)
10 10833 bp 69.57 10.83 98.42
PLM1_100_coex_sep16_scaffold_2064
Species: R_Rokubacteria_73_56 (50%)
4 5170 bp 74.49 9.75 98.41
PLM1_100_coex_sep16_scaffold_1949
Species: GWB2_Chloroflexi_54_36_curated (60%)
5 5332 bp 70.37 11.51 98.41
PLM1_100_coex_sep16_scaffold_1744
Species: R_Rokubacteria_73_56 (50%)
12 10117 bp 75.28 10.79 98.39
PLM1_100_coex_sep16_scaffold_1363
Phylum: Rokubacteria (100%)
9 7654 bp 70.64 10.82 98.30
PLM1_100_coex_sep16_scaffold_5233
Species: RLO_Rokubacteria_71_22 (50%)
4 3165 bp 70.08 8.67 98.29
PLM1_100_coex_sep16_scaffold_4437
Species: GWA2_Rokubacteria_73_35_curated (60%)
5 3456 bp 73.47 9.98 98.26
PLM1_100_coex_sep16_scaffold_1670
Species: R_Rokubacteria_73_56 (57.14%)
7 5820 bp 69.62 8.48 98.25
PLM1_100_coex_sep16_scaffold_3781
Species: R_Alphaproteobacteria_66_14 (50%)
4 3741 bp 70.97 10.02 98.24
PLM1_100_coex_sep16_scaffold_7404
Species: RLO_RIF03_38_15 (66.67%)
3 3885 bp 70.17 6.37 98.22
PLM1_100_coex_sep16_scaffold_2581
Phylum: Rokubacteria (75%)
4 4598 bp 71.42 10.44 98.19
PLM1_100_coex_sep16_scaffold_4595
Phylum: Proteobacteria (60%)
5 3383 bp 74.25 11.40 98.17
PLM1_100_coex_sep16_scaffold_3642
Species: R_Betaproteobacteria_64_14 (50%)
2 3814 bp 71.68 9.52 98.16
PLM1_100_coex_sep16_scaffold_5784
Species: R_Rokubacteria_71_18 (66.67%)
3 3023 bp 69.20 9.92 98.15
PLM1_100_coex_sep16_scaffold_3040
Domain: Bacteria (80%)
5 4209 bp 72.25 8.52 98.15
PLM1_100_coex_sep16_scaffold_10180
Species: Dyella jiangningensis (50%)
4 3088 bp 71.79 10.44 98.12
PLM1_100_coex_sep16_scaffold_4025
Phylum: Rokubacteria (75%)
4 3620 bp 72.62 8.00 98.12
PLM1_100_coex_sep16_scaffold_1805
Phylum: Proteobacteria (50%)
8 8730 bp 70.13 13.01 98.11
PLM1_100_coex_sep16_scaffold_3595
Phylum: Rokubacteria (100%)
7 6905 bp 69.60 9.10 98.10
PLM1_100_coex_sep16_scaffold_9559
Class: Betaproteobacteria (60%)
5 3429 bp 70.22 16.05 98.08
PLM1_100_coex_sep16_scaffold_5387
Domain: Bacteria (100%)
4 4194 bp 68.93 13.13 98.07
PLM1_100_coex_sep16_scaffold_11348
Species: R_Rokubacteria_73_56 (75%)
4 2744 bp 72.49 9.68 98.07
PLM1_100_coex_sep16_scaffold_6099
Species: R_NC10_66_22 (83.33%)
6 4736 bp 69.05 11.72 98.06
PLM1_100_coex_sep16_scaffold_3861
Domain: Bacteria (80%)
5 3696 bp 72.62 10.39 98.05
PLM1_100_coex_sep16_scaffold_7874
Phylum: Rokubacteria (100%)
3 2584 bp 68.61 10.04 97.99
PLM1_100_coex_sep16_scaffold_1574
Species: R_Rokubacteria_73_56 (50%)
8 5999 bp 70.25 10.08 97.97
PLM1_100_coex_sep16_scaffold_1581
Domain: Bacteria (85.71%)
7 5981 bp 70.79 11.26 97.96
PLM1_100_coex_sep16_scaffold_3634
Phylum: Rokubacteria (66.67%)
3 3819 bp 74.18 10.57 97.96
PLM1_100_coex_sep16_scaffold_2300
Species: R_Rokubacteria_73_56 (50%)
6 7228 bp 68.48 11.77 97.91
PLM1_100_coex_sep16_scaffold_4951
Phylum: Rokubacteria (100%)
3 3256 bp 72.11 9.12 97.85
PLM1_100_coex_sep16_scaffold_3789
Species: R_Rokubacteria_71_18 (50%)
4 3738 bp 70.22 10.23 97.83
PLM1_100_coex_sep16_scaffold_3733
Phylum: Proteobacteria (50%)
8 5559 bp 71.15 11.49 97.79
PLM1_100_coex_sep16_scaffold_3066
Species: R_Rokubacteria_73_56 (77.78%)
9 6593 bp 72.11 11.85 97.79
PLM1_100_coex_sep16_scaffold_7782
Phylum: Rokubacteria (66.67%)
3 2599 bp 71.37 11.43 97.77
PLM1_100_coex_sep16_scaffold_6094
Order: Rhodospirillales (50%)
4 2943 bp 68.64 11.11 97.76
PLM1_100_coex_sep16_scaffold_666
Domain: Bacteria (100%)
11 10366 bp 68.82 10.38 97.73
PLM1_100_coex_sep16_scaffold_739
Phylum: Rokubacteria (60%)
10 9239 bp 69.66 11.43 97.71
PLM1_100_coex_sep16_scaffold_2290
Species: R_Rokubacteria_73_56 (75%)
4 4889 bp 71.96 8.38 97.69
PLM1_100_coex_sep16_scaffold_2606
Phylum: Rokubacteria (100%)
5 4573 bp 68.03 11.58 97.68
PLM1_100_coex_sep16_scaffold_12418
Species: R_Rokubacteria_73_56 (100%)
4 3572 bp 72.76 11.09 97.68
PLM1_100_coex_sep16_scaffold_5711
Species: Candidatus Entotheonella sp. TSY1 (50%)
4 3041 bp 69.62 13.27 97.67
PLM1_100_coex_sep16_scaffold_7204
Species: R_Rokubacteria_73_56 (75%)
4 2704 bp 71.75 8.49 97.63
PLM1_100_coex_sep16_scaffold_5182
Phylum: Rokubacteria (88.89%)
9 6231 bp 72.12 10.23 97.59
PLM1_100_coex_sep16_scaffold_3019
Species: GWA2_Rokubacteria_70_23_curated (60%)
5 4226 bp 70.71 10.33 97.54
PLM1_100_coex_sep16_scaffold_3296
Species: R_Rokubacteria_73_56 (60%)
5 5812 bp 72.26 10.40 97.51
PLM1_100_coex_sep16_scaffold_5258
Species: R_Rokubacteria_73_56 (100%)
2 3157 bp 69.75 10.26 97.50
Displaying items 101-150 of 679 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.