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PLM2_5_b1_sep16_scaffold_13

Search features with annotation key words

Displaying items 91-120 of 182 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_13_90
unknown

Not on your lists

comp(106681..107613)
DNA (933bp) protein (311aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_13_91
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(108126..109832)
DNA (1707bp) protein (569aa)
Methyl-accepting chemotaxis protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H1_GEMAT
methyl-accepting chemotaxis protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_13_92
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(109842..110408)
DNA (567bp) protein (189aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H2_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_13_93
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(110405..111322)
DNA (918bp) protein (306aa)
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H3_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_13_94
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

111366..112733
DNA (1368bp) protein (456aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H4_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_13_95
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

112730..114946
DNA (2217bp) protein (739aa)
Probable soluble lytic murein transglycosylase Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZR1_THERP
putative soluble lytic murein transglycosylase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_13_96
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

115038..115238
DNA (201bp) protein (67aa)
Cold shock DNA/RNA-binding protein Tax=Geobacter sulfurreducens RepID=D7AFQ8_GEOSK
Cold-shock protein DNA-binding protein
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:AHG88687.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_13_97
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

115308..118115
DNA (2808bp) protein (936aa)
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H5_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_13_98
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

118215..118592
DNA (378bp) protein (126aa)
Putative pilin Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H6_GEMAT
putative pilin
Putative pilin {ECO:0000313|EMBL:AHG88689.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_13_99
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

118638..118880
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H7_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_13_100
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(118901..121174)
DNA (2274bp) protein (758aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037842C0
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_13_101
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

121267..122061
DNA (795bp) protein (265aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC26_GEMAT
peptidase M10A and M12B matrixin and adamalysin
Peptidase M10A and M12B matrixin and adamalysin {ECO:0000313|EMBL:AHG89655.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_13_102
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

122075..123184
DNA (1110bp) protein (370aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) bin=bin3_NC10 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_13_103
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

123175..124302
DNA (1128bp) protein (376aa)
Beta-lactamase family protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC30_GEMAT
beta-lactamase family protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_13_104
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

124292..124660
DNA (369bp) protein (123aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative thiol-disulfide oxidoreductase DCC
Tax=GWA2_Rokubacteria_73_35_curated
PLM2_5_b1_sep16_scaffold_13_105
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

124685..124990
DNA (306bp) protein (102aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC31_GEMAT
protein of unknown function DUF59
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_13_106
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(124987..126060)
DNA (1074bp) protein (358aa)
Putative ribonuclease Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC33_GEMAT
3'-5' exonuclease
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_13_107
unknown

Not on your lists

comp(126104..126274)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_13_108
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

126299..127207
DNA (909bp) protein (303aa)
1-aminocyclopropane-1-carboxylate deaminase (EC:3.5.99.7); K05396 D-cysteine desulfhydrase [EC:4.4.1.15] bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:ERH09460.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_13_109
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

127204..128412
DNA (1209bp) protein (403aa)
Putative hydrolase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC35_GEMAT
putative hydrolase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_13_110
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

128427..128912
DNA (486bp) protein (162aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R9_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37579.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM2_5_b1_sep16_scaffold_13_111
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(128909..129181)
DNA (273bp) protein (91aa)
Ferredoxin Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC37_GEMAT
ferredoxin
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_13_112
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(129215..130225)
DNA (1011bp) protein (337aa)
Zn-dependent protease Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLI9_SINAD
Zn-dependent protease
Zn-dependent protease {ECO:0000313|EMBL:AGA30254.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM2_5_b1_sep16_scaffold_13_113
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(130236..130970)
DNA (735bp) protein (245aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN35_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30253.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM2_5_b1_sep16_scaffold_13_114
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131020..131943)
DNA (924bp) protein (308aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MNB4_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE05340.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
PLM2_5_b1_sep16_scaffold_13_115
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131973..132557)
DNA (585bp) protein (195aa)
Transcriptional regulator Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0UX56_9PSEU
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:KFE68180.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
TetR family transcriptional regulator
PLM2_5_b1_sep16_scaffold_13_116
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

132648..133031
DNA (384bp) protein (128aa)
hypothetical protein Tax=Actinopolyspora mortivallis RepID=UPI00035D3021
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADB48838.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_13_117
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

133061..133681
DNA (621bp) protein (207aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XTW0_SORCE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_13_118
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(133688..134662)
DNA (975bp) protein (325aa)
peptidase M28 bin=bin3_NC10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
peptidase M28
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_13_119
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

134751..136607
DNA (1857bp) protein (619aa)
Gamma-glutamyltranspeptidase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q090F1_STIAD
gamma-glutamyltranspeptidase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying items 91-120 of 182 in total

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