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PLM2_5_b1_sep16_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 182 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_13_1
GWA2_OP11_nov_42_16, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

261..2063
DNA (1803bp) protein (601aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS42077.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_42_16.;"
hypothetical protein bin=WS6_GWC1_33_20 species=GWE2_WS6_33_161 genus=GWE2_WS6_33_161 taxon_order=GWE2_WS6_33_161 taxon_class=GWE2_WS6_33_161 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria)
PLM2_5_b1_sep16_scaffold_13_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2067..3584
DNA (1518bp) protein (506aa)
Stk1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1Q1_THERP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_13_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3581..4645
DNA (1065bp) protein (355aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_13_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4642..5295
DNA (654bp) protein (218aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_13_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5301..5963)
DNA (663bp) protein (221aa)
RNA-binding protein Tax=Hippea alviniae RepID=UPI0003B4BD5D
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_13_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5960..6520)
DNA (561bp) protein (187aa)
hypothetical protein Tax=Desulfovibrio oxyclinae RepID=UPI000375EB3A
glycoside hydrolase family 13
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_13_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6517..7071)
DNA (555bp) protein (185aa)
RNA polymerase sigma factor RpoE Tax=Schlesneria paludicola RepID=UPI00029A9387
RNA polymerase sigma factor, sigma-70 family
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_13_8
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7236..7559
DNA (324bp) protein (108aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Leptolyngbya sp. PCC 7376 RepID=K9Q687_9CYAN
RNA polymerase {ECO:0000313|EMBL:KGF73133.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola sy1.;"
ECF subfamily RNA polymerase sigma-24 subunit
PLM2_5_b1_sep16_scaffold_13_9
Boreogadus saida, Boreogadus, Gadiformes, Neopterygii, Chordata, Metazoa

Not on your lists

7556..7945
DNA (390bp) protein (130aa)
Antifreeze glycoprotein Tax=Boreogadus saida RepID=H2KMI3_BORSA
FecR family protein
Antifreeze glycoprotein {ECO:0000313|EMBL:AAQ09565.1}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Boreogadus.;" source="Boreogadus saida (Polar cod).;"
PLM2_5_b1_sep16_scaffold_13_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7982..9079
DNA (1098bp) protein (366aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_13_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

9141..9563
DNA (423bp) protein (141aa)
id=3479344 bin=GWC1_Spirochaetes_27_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_13_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9619..12306)
DNA (2688bp) protein (896aa)
TonB-dependent receptor Tax=uncultured bacterium W5-51b RepID=H9BX72_9BACT
TonB-dependent receptor
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_13_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12324..15167)
DNA (2844bp) protein (948aa)
ligand-gated channel Tax=Salisaeta longa RepID=UPI0003B4BA4A
bfeA; ferric enterobactin receptor
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_13_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15212..15958)
DNA (747bp) protein (249aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035EDC27
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88355.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_13_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(15959..17731)
DNA (1773bp) protein (591aa)
AAA family ATPase Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MMJ0_CORCM
hflB2; AAA ATPase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_13_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17709..18269)
DNA (561bp) protein (187aa)
Phosphatidylethanolamine N-methyltransferase Tax=Strigomonas culicis RepID=S9VX68_9TRYP
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_13_17
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18269..19000)
DNA (732bp) protein (244aa)
Uncharacterized protein Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SJA2_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB50170.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
PLM2_5_b1_sep16_scaffold_13_18
unknown

Not on your lists

19125..19475
DNA (351bp) protein (117aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_13_19
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

19472..20644
DNA (1173bp) protein (391aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE85585.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Probable lipoprotein bin=GWC2_Ignavibacteria_56_12 species=Flavobacterium psychrophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
PLM2_5_b1_sep16_scaffold_13_20
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

20783..22600
DNA (1818bp) protein (606aa)
NHL repeat containing protein bin=GWA2_Elusimicrobia_56_46 species=Geobacillus thermoglucosidasius genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
PLM2_5_b1_sep16_scaffold_13_21
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

22700..23962
DNA (1263bp) protein (421aa)
PA14 domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XL26_9BACT
PA14 domain protein {ECO:0000313|EMBL:EEF59520.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Ricin B lectin
PLM2_5_b1_sep16_scaffold_13_22
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

23922..24308
DNA (387bp) protein (129aa)
PA14 domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XL26_9BACT
PA14 domain protein {ECO:0000313|EMBL:EEF59520.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Fibronectin type III domain./Legume lectin domain
PLM2_5_b1_sep16_scaffold_13_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24312..25205
DNA (894bp) protein (298aa)
Ornithine cyclodeaminase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIR8_THET1
ornithine cyclodeaminase/mu-crystallin
Ornithine cyclodeaminase/mu-crystallin {ECO:0000313|EMBL:AHG88343.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_13_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

25198..26163
DNA (966bp) protein (322aa)
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025L3_SOLUE
pyridoxal-5'-phosphate-dependent protein subunit beta
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM2_5_b1_sep16_scaffold_13_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26147..27559)
DNA (1413bp) protein (471aa)
N-acyl-D-aspartate/D-glutamate deacylase Tax=Rhodanobacter denitrificans RepID=M4NHD1_9GAMM
D-aminoacylase domain protein
D-aminoacylase domain protein {ECO:0000313|EMBL:AHG92236.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_13_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

27869..29158
DNA (1290bp) protein (430aa)
Amino acid permease Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A775_GEMAT
amino acid permease
Amino acid permease {ECO:0000313|EMBL:AHG91760.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_13_27
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29178..30296
DNA (1119bp) protein (373aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SU5_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:GAO39148.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_13_trna_1
unknown

Not on your lists

comp(30365..30437)
DNA (73bp)
transferRNA Phe
PLM2_5_b1_sep16_scaffold_13_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

30531..33299
DNA (2769bp) protein (923aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026P4_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:AHG91206.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_13_29
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

33539..34924
DNA (1386bp) protein (462aa)
Phosphoesterase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR81_KORVE
phosphoesterase
Phosphoesterase {ECO:0000313|EMBL:ABF40619.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Displaying items 1-30 of 182 in total

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