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PLM2_5_b1_sep16_scaffold_3307_6

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 6850..8436

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG25_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 534.0
  • Bit_score: 479
  • Evalue 2.90e-132
RNA polymerase, sigma 54 subunit, RpoN/SigL {ECO:0000313|EMBL:CDM66191.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 534.0
  • Bit_score: 639
  • Evalue 4.00e-180
RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 534.0
  • Bit_score: 479
  • Evalue 8.20e-133

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1587
ATGTCATCTCTTCGACTCACTACTCAGTTACAGCAAAAGATGGTCTTGACGCCTCAGCTGCGTCAGCGTATCGAAATGCTGCAAATGACCTCGCTTGAGTTGAATGAACTCATAGAACAAGAGATGGTCGCCAACCCGGTACTCGAAGAGGTACAGGCCGGCGAGGAAGTCCAGGAGATAGGCGCAAGCATCCTCGATCAAAACTCCGATGGAGTTGATGTCGACTATACGGGCCCGCCCGACCTTGCCGGTGACGCTCCGGCGGATGGGGCCGAGGCATTTGAGGCTGCCGTTCCGGAAGGTGCCGAGCTAAACGGCTCGAGTGAAAAAATAACCGCCGAATCTGTCGGTGACGACGAAATGAGCGGCGAGTCGCCCGAAACCGGTGACGCTGCCGACTCGTTTGATGAGATCGATTACGGCCGCGAGTTTCAGGATTACCTGGACCCCGGCTATCGAACGCAGGAAATCGAGTACAAAGACGACTCGCCGAGTTTTGAACAGTTTCTGACCCATGCTCCATCCTTGAGTGAGCATCTGGAATGGCAGTTAAACCTGCTGAGTCTGGACGAAAAAGCACATGATGCGGCGATCGAGGTCATTGGCAATTTGGATGAGGACGGCCGGCTAACGGCTAGTGTCGAGGAAATTGCCGAATCATGCGGTGTCTCTCTGCAAACCGTCGAACGTGCCCGTCAGGCGGTAATGAAGTTAGATCCCGTCGGTTGCGGGGCCTTTACCGTGCAGGAGTGTTTGCTGGCCCAATTGGAATCGAACGGCAACAATGGGGAGCTTGCTGCTGAACTCGTCCGCGACCATCTCGAGGACCTGCAGCCCCACAGATTACAACATTTGGCCAAAAAAACCGGGGTAGATGTTCACGTCCTCGATAACGAACTTGAAAAGATCAGGTGCCTGGACCCCTATCCCGGCCGCCGCTATTCGGCCGAAGATGCTGTGTTTGTCTCGCCCGAGGTTTATGTCGAAAAGCTCGAGGACGATTATGTCATCTACTTTGCCGACGACGGCAGCCCGCGGCTCCGTATAAGCCCGACCTATCACAAGCTCCTGGACCAGACCGATACAACTAAAGAGACCAAGGATTTTATAAAGGAAAAGGTGCGCTCTGCCGTTGACCTGCTTCGCAACATCGAGCACCGCCGGCAAACCATCTATCGCGTGGTGGAGTGCATTGTTTCACGACAGCGCGACTTCCTGGACAAGGGCGTCGAGTATATCAAGCCGATGATGCTAAAAGATATCGCCGCCGACATCGGCATGCACCTTTCTACCATCTCGCGCGTGGTTAACCGTAAGTACGCACACACGCCCCAGGGTGTTATTGAATTAAGAAGGTTCTTTAGCGAAGGGATGTTAAATGAAGAGGGCGAAGAGGTTTCGACCCGCATTCTGAAATTGAGAATAAAGAAAATGGTAGAAGAGGAGGACACAAAAAAACCACTGACAGACGATCAGATCGCACGTGTTTTGAGTAATGAGGGGGTTAAACTCTCGCGCCGGACGGTCGCAAAATATCGTGACCAAATGAATATTCCGGGTTCGCGCGAGAGGAAGACTGTAGTTTAG
PROTEIN sequence
Length: 529
MSSLRLTTQLQQKMVLTPQLRQRIEMLQMTSLELNELIEQEMVANPVLEEVQAGEEVQEIGASILDQNSDGVDVDYTGPPDLAGDAPADGAEAFEAAVPEGAELNGSSEKITAESVGDDEMSGESPETGDAADSFDEIDYGREFQDYLDPGYRTQEIEYKDDSPSFEQFLTHAPSLSEHLEWQLNLLSLDEKAHDAAIEVIGNLDEDGRLTASVEEIAESCGVSLQTVERARQAVMKLDPVGCGAFTVQECLLAQLESNGNNGELAAELVRDHLEDLQPHRLQHLAKKTGVDVHVLDNELEKIRCLDPYPGRRYSAEDAVFVSPEVYVEKLEDDYVIYFADDGSPRLRISPTYHKLLDQTDTTKETKDFIKEKVRSAVDLLRNIEHRRQTIYRVVECIVSRQRDFLDKGVEYIKPMMLKDIAADIGMHLSTISRVVNRKYAHTPQGVIELRRFFSEGMLNEEGEEVSTRILKLRIKKMVEEEDTKKPLTDDQIARVLSNEGVKLSRRTVAKYRDQMNIPGSRERKTVV*