ggKbase home page

PLM2_5_b1_sep16_scaffold_3307_7

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 8487..8834

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLF6_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 35.4
  • Coverage: 113.0
  • Bit_score: 80
  • Evalue 1.10e-12
Ribosomal subunit interface protein {ECO:0000313|EMBL:CDM66192.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 116.0
  • Bit_score: 129
  • Evalue 2.20e-27
ribosomal subunit interface protein similarity KEGG
DB: KEGG
  • Identity: 35.4
  • Coverage: 113.0
  • Bit_score: 80
  • Evalue 3.10e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGAACTTTGAATTTACAGGACGGCATATGGAGGTAACTCCGGCTCTTCGGGCACACGTCGAGGAGCAATTTAAAAAGTTAGAGGATGTTTTTGACGGCAGACCGGCGAGTGCACACGTCATTATCGAGGTCGAACGTGGACGGCACCGGTCCGAGATCGTCATGAACTGGCGTAACGAGGTACTGACCGCTAATTCCAGCGTGTCTGATATGTATCAATCGTTGACGCAAACCGTTTCGAAGATCGAAAAACAAGCCCGGCGATTAAAGGAAAAGGTTATAGATAAATCGCACCGGGCGGTTAAAGCTGCGGCTATTACGGCTCCGCCTGAAAGCGACGCAGCTTAG
PROTEIN sequence
Length: 116
MNFEFTGRHMEVTPALRAHVEEQFKKLEDVFDGRPASAHVIIEVERGRHRSEIVMNWRNEVLTANSSVSDMYQSLTQTVSKIEKQARRLKEKVIDKSHRAVKAAAITAPPESDAA*