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PLM2_5_b1_sep16_scaffold_3307

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_3307_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3..629
DNA (627bp) protein (209aa)
Short-chain dehydrogenase/reductase SDR Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XBS7_METSD
Uncharacterized protein {ECO:0000313|EMBL:CDM66186.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
short chain dehydrogenase
PLM2_5_b1_sep16_scaffold_3307_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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714..1607
DNA (894bp) protein (298aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006, ECO:0000256|SAAS:SAAS00094257};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Undecaprenyl-diphosphatase bin=GWC2_Ignavibacteria_38_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
undecaprenol kinase
PLM2_5_b1_sep16_scaffold_3307_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1614..3329
DNA (1716bp) protein (572aa)
Exonuclease RecJ {ECO:0000313|EMBL:CDM66188.1}; EC=3.1.-.- {ECO:0000313|EMBL:CDM66188.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00038284A3
single-stranded-DNA-specific exonuclease RecJ
PLM2_5_b1_sep16_scaffold_3307_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3322..5955
DNA (2634bp) protein (878aa)
Uncharacterized protein conserved in bacteria Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIS1_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM66189.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_3307_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5972..6745
DNA (774bp) protein (258aa)
ABC-type (Unclassified) transport system, ATPase component {ECO:0000313|EMBL:CDM66190.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDM66190.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ABC transporter ATP-binding protein Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003774675
ATP-binding protein
PLM2_5_b1_sep16_scaffold_3307_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6850..8436
DNA (1587bp) protein (529aa)
RNA polymerase sigma-54 factor Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG25_CHLTF
RNA polymerase, sigma 54 subunit, RpoN/SigL {ECO:0000313|EMBL:CDM66191.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
RNA polymerase sigma-54 factor
PLM2_5_b1_sep16_scaffold_3307_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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8487..8834
DNA (348bp) protein (116aa)
Ribosomal subunit interface protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLF6_CHLTF
Ribosomal subunit interface protein {ECO:0000313|EMBL:CDM66192.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ribosomal subunit interface protein
PLM2_5_b1_sep16_scaffold_3307_8
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8849..9418
DNA (570bp) protein (190aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix rhusiopathiae ATCC 19414.;"
HPr(Ser) kinase/phosphatase Tax=Erysipelothrix tonsillarum RepID=UPI0003639542
hprK; HPr kinase/phosphorylase
PLM2_5_b1_sep16_scaffold_3307_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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9421..10317
DNA (897bp) protein (299aa)
Nucleotide-binding protein PYK22_02206 {ECO:0000256|HAMAP-Rule:MF_00636}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
UPF0042 nucleotide-binding protein AciPR4_1305 bin=GWC2_Nitrospirae_57_13 species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
PLM2_5_b1_sep16_scaffold_3307_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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10348..10773
DNA (426bp) protein (142aa)
Phosphotransferase system, mannose/fructose-specific component IIA {ECO:0000313|EMBL:CDM66195.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDM66195.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PTS system transporter subunit IIA (EC:2.7.1.69)
PTS system IIA component Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGJ3_CHLTF
PLM2_5_b1_sep16_scaffold_3307_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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10766..11038
DNA (273bp) protein (91aa)
Phosphotransferase system HPr (HPr) family protein {ECO:0000313|EMBL:CDM66196.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
HPr-like protein crh; K11189 phosphocarrier protein bin=BACIGN_2 species=Salinibacter ruber genus=Salinibacter taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
phosphotransferase system, phosphocarrier protein HPr
PLM2_5_b1_sep16_scaffold_3307_12

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11055..11219
DNA (165bp) protein (55aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 12 items

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