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PLM2_5_b1_sep16_scaffold_9355

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_9355_1
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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150..1028
DNA (879bp) protein (293aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI00036A89E6
RNA polymerase sigma 70 {ECO:0000313|EMBL:KKA41445.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
RNA polymerase sigma 70
PLM2_5_b1_sep16_scaffold_9355_2
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1096..1857
DNA (762bp) protein (254aa)
Uncharacterized protein Tax=Nocardia brasiliensis ATCC 700358 RepID=K0F988_9NOCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO03121.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
PLM2_5_b1_sep16_scaffold_9355_3
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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comp(2170..2370)
DNA (201bp) protein (67aa)
hypothetical protein Tax=Longispora albida RepID=UPI00035D224A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG88414.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM2_5_b1_sep16_scaffold_9355_4
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(2547..3593)
DNA (1047bp) protein (349aa)
Chalcone and stilbene synthase domain protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S5V1_GEOOG
Chalcone synthase {ECO:0000313|EMBL:KGH46085.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
chalcone and stilbene synthase domain-containing protein
PLM2_5_b1_sep16_scaffold_9355_5
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3587..4777)
DNA (1191bp) protein (397aa)
Acyl-CoA dehydrogenase Tax=Saccharomonospora cyanea NA-134 RepID=H5XMQ8_9PSEU
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EHR61037.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
acyl-CoA dehydrogenase
PLM2_5_b1_sep16_scaffold_9355_6
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4774..5505)
DNA (732bp) protein (244aa)
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:EWC62496.1}; EC=2.1.1.64 {ECO:0000313|EMBL:EWC62496.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
3-demethylubiquinone-9 3-methyltransferase Tax=Micromonospora lupini str. Lupac 08 RepID=I0LD89_9ACTO
type 11 methyltransferase
PLM2_5_b1_sep16_scaffold_9355_7
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5515..6021)
DNA (507bp) protein (169aa)
Putative uncharacterized protein Tax=Frankia sp. (strain EAN1pec) RepID=A8KXZ4_FRASN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW14355.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM2_5_b1_sep16_scaffold_9355_8
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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6121..6909
DNA (789bp) protein (263aa)
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily Tax=Frankia sp. (strain EuI1c) RepID=E3IV06_FRASU
sigma-B/F/G subfamily RNA polymerase sigma-28 factor
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG {ECO:0000313|EMBL:KJE22944.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
PLM2_5_b1_sep16_scaffold_9355_9
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6919..7179)
DNA (261bp) protein (87aa)
zinc finger, UBP-type Tax=Actinomadura atramentaria RepID=UPI000370F2C9
Uncharacterized protein {ECO:0000313|EMBL:KJK46820.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
zinc finger, UBP-type
Displaying 9 items

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