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PLM3-1_170_b1_sep16_scaffold_314_1

Organism: PLM6_170_b1_sep16_Acidobacteria_62_11

near complete RP 49 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(197..541)

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 135.0
  • Bit_score: 121
  • Evalue 4.30e-25
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 108.0
  • Bit_score: 101
  • Evalue 1.00e-19
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 120.0
  • Bit_score: 149
  • Evalue 1.60e-33

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 345
GTGCTCCAGCGCCATCGCTGGAAGGGCAACATCCGTGAGCTGCGCAACACCATCGAGCGGCTGGTGATCATGACGCCGGGCGACGAAATCGGCGTGAATGAGTTACCCGAAGCGATGCGCGTTGACCGCGCGCCTCGGCCATCCGATAATAAGGGGAGCGAGGCCAGCGCCGCTGGCGGTACCCTTCGTGGGTTCAAGGAGCTGGCCGAGCGCAAATTCCTCGTCGAGAAATTGCGCGAGAACGGCTGGAACATCTCGAAAACCGCTGAAATCATCGGCACTCCGCGCAGCAACCTTTACAAGAAGCTCGAGCAGTACAACATCCGTCAGGAAAGCGACGGGTAA
PROTEIN sequence
Length: 115
VLQRHRWKGNIRELRNTIERLVIMTPGDEIGVNELPEAMRVDRAPRPSDNKGSEASAAGGTLRGFKELAERKFLVEKLRENGWNISKTAEIIGTPRSNLYKKLEQYNIRQESDG*