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PLM3-1_170_b1_sep16_scaffold_314_2

Organism: PLM6_170_b1_sep16_Acidobacteria_62_11

near complete RP 49 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(504..1466)

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 297.0
  • Bit_score: 418
  • Evalue 3.70e-114
two component sigma54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 297.0
  • Bit_score: 352
  • Evalue 1.20e-94
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 302.0
  • Bit_score: 464
  • Evalue 6.30e-128

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGAAACCCCGCATCCTGCTCATCGACGACGAAGCCGCCATCCGGGACTCCATGAAAATGATCCTGGAGTACGAAGGCTACGAGTTCGTGGGCGCGGCGACCGGTCAGGACGGCCTCAGCATCATCGAGAAGGAACCGCCTGACCTTGTCTTCCTCGACATCAAAATGCCCGGCATGGATGGTCTCGAAGTGCTCGGGCGCATCAAGGGAATGAATGAGGCGCTCCCGGTGGTGATCGTATCGGGGCACGCGACCATCGAGACGGCCGTCGAAGCGACCAAGAAGGGGGCATTCGATTTCATCGAGAAGCCGCTCTCGCGGGATCGCATCGACGTCACGGTTCGAAATGCGCTGGATCAGAACCGGCTCAAGGATGAAAACCGATCGCTGAAGCAAACGCTCGAAGCTCGCTATCAGATGATCGGCGACAGCCCGGCGCTGCGCCAGGCGATGGAGGCGATTCGCCGGGCGGCTCCCACCAACGCGACGGTCCTGATCCAGGGCGAAAGCGGCGTCGGGAAGGAGCTCGTGGCCCGCATGATTCACCGCAACAGCCCGCGCAGCCGCGAACGGTTCGTGCAGGTGAACTGCGCCGCGATCCCGGACGACTTGATCGAGTCGGAGCTGTTCGGGCACGAAAAAGGATCGTTTACGGGCGCCACCGAAAAGCAGATCGGCAAGTTCGAGCAAGCGGACCATGGAACCATCTTCCTCGACGAAATCGGCGATATGAGCCTGAAGACGCAGGCCAAGGTCCTGCGAGTGCTTCAGGAAGGCGAAGTGGAGCGGCTCGGCTCGGCGCGAACCATCAAGGTGGACGTCCGTGTGATCGCTGCCACCAACAAGAACCTTGAAGAGGAGATCGAGCAGGGGCACTTCCGTGAGGACCTTGCGGCCGAAGCGGCTCTCGCCGGCCGGGCTCGACGTGCTCCAGCGCCATCGCTGGAAGGGCAACATCCGTGA
PROTEIN sequence
Length: 321
MKPRILLIDDEAAIRDSMKMILEYEGYEFVGAATGQDGLSIIEKEPPDLVFLDIKMPGMDGLEVLGRIKGMNEALPVVIVSGHATIETAVEATKKGAFDFIEKPLSRDRIDVTVRNALDQNRLKDENRSLKQTLEARYQMIGDSPALRQAMEAIRRAAPTNATVLIQGESGVGKELVARMIHRNSPRSRERFVQVNCAAIPDDLIESELFGHEKGSFTGATEKQIGKFEQADHGTIFLDEIGDMSLKTQAKVLRVLQEGEVERLGSARTIKVDVRVIAATNKNLEEEIEQGHFREDLAAEAALAGRARRAPAPSLEGQHP*