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PLM3-1_50_b1_sep16_scaffold_1476

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1476_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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567..818
DNA (252bp) protein (84aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
DNA-directed RNA polymerase subunit H Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE60_NITGG
PLM3-1_50_b1_sep16_scaffold_1476_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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822..4172
DNA (3351bp) protein (1117aa)
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
DNA-directed RNA polymerase Tax=Candidatus Nitrososphaera gargensis RepID=K0ILI7_NITGG
PLM3-1_50_b1_sep16_scaffold_1476_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4178..8002
DNA (3825bp) protein (1275aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase Tax=Candidatus Nitrososphaera gargensis RepID=K0IC33_NITGG
PLM3-1_50_b1_sep16_scaffold_1476_4
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7971..8285
DNA (315bp) protein (105aa)
50S ribosomal protein L30e Tax=Candidatus Nitrososphaera gargensis RepID=K0I766_NITGG
ribosomal protein L30E
Ribosomal protein L30E {ECO:0000313|EMBL:AIF84790.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_1476_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8469..8888
DNA (420bp) protein (140aa)
Archaeal NusA family KH domain containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH19_NITGG
archaeal NusA family KH domain containing protein
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1476_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8902..9339
DNA (438bp) protein (146aa)
30S ribosomal protein S12 Tax=Candidatus Nitrososphaera gargensis RepID=K0IE68_NITGG
rps12p; 30S ribosomal protein S12p
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_1476_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9345..9947
DNA (603bp) protein (201aa)
30S ribosomal protein S7 Tax=Candidatus Nitrososphaera gargensis RepID=K0ILJ0_NITGG
rps7p; 30S ribosomal protein S7p
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1476_8
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10051..11103
DNA (1053bp) protein (351aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC41_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15605.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Displaying 8 items

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