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PLM3_60_coex_sep16_scaffold_10

Search features with annotation key words

Displaying items 61-90 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_10_57
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63770..65026
DNA (1257bp) protein (419aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI0003725384
putative Lipoprotein releasing system, transmembrane protein, LolC/E family
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
PLM3_60_coex_sep16_scaffold_10_58
GWF2_Alphaproteobacteria_58_20_curated, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65039..66277
DNA (1239bp) protein (413aa)
Lipoprotein ABC transporter permease component LolC Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8U8_AZOL4
lolC; Lipoprotein ABC transporter; permease component LolC
Tax=GWF2_Alphaproteobacteria_58_20_curated
PLM3_60_coex_sep16_scaffold_10_59
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66270..66959
DNA (690bp) protein (230aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ABC transporter related protein Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TM00_TISMK
lolD; ABC transporter
PLM3_60_coex_sep16_scaffold_10_60
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66990..70475
DNA (3486bp) protein (1162aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
DNA polymerase III subunit alpha Tax=Oceanibaculum indicum P24 RepID=K2JY99_9PROT
dnaE; DNA polymerase III subunit alpha
PLM3_60_coex_sep16_scaffold_10_61
unknown

Not on your lists

71141..71704
DNA (564bp) protein (188aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_10_62
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71844..72407
DNA (564bp) protein (188aa)
N-acetylmuramoyl-L-alanine amidase LytC {ECO:0000313|EMBL:KFB75868.1}; EC=3.5.1.28 {ECO:0000313|EMBL:KFB75868.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
Putative N-acetylmuramoyl-L-alanine amidase Tax=Clostridium intestinale URNW RepID=U2Q8E4_9CLOT
N-acetylmuramoyl-l-alanine amidase I
PLM3_60_coex_sep16_scaffold_10_63
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72498..72875)
DNA (378bp) protein (126aa)
Two-component response regulator Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DF36_BRAJP
Response regulator, CheY-like receiver
Response regulator, CheY-like receiver {ECO:0000313|EMBL:CCQ72428.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
PLM3_60_coex_sep16_scaffold_10_64
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72940..75465)
DNA (2526bp) protein (842aa)
Putative calcium-binding protein Tax=Bradyrhizobium sp. WSM1253 RepID=I2Q9X7_9BRAD
Putative Ca binding protein {ECO:0000313|EMBL:BAR60305.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
Ca binding protein
PLM3_60_coex_sep16_scaffold_10_65
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76094..76744)
DNA (651bp) protein (217aa)
Glutathione S-transferase Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MSZ1_CORCM
Glutathione S-transferase {ECO:0000313|EMBL:EYF04439.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
gst4; glutathione S-transferase
PLM3_60_coex_sep16_scaffold_10_66
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

77071..78063
DNA (993bp) protein (331aa)
Aldo/keto reductase Tax=Gloeobacter kilaueensis JS1 RepID=U5QP35_9CYAN
Aldo/keto reductase {ECO:0000313|EMBL:KIE10108.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
aldo/keto reductase
PLM3_60_coex_sep16_scaffold_10_67
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78209..78910
DNA (702bp) protein (234aa)
Uncharacterized protein Tax=Caenispirillum salinarum AK4 RepID=K9HG99_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV29488.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
Crp/Fnr family transcriptional regulator
PLM3_60_coex_sep16_scaffold_10_68
unknown

Not on your lists

79151..79462
DNA (312bp) protein (104aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_10_69
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79593..80570
DNA (978bp) protein (326aa)
Uncharacterized protein Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UJ92_SINMW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR63722.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
PLM3_60_coex_sep16_scaffold_10_70

Not on your lists

80745..82463
DNA (1719bp) protein (573aa)
Putative PQQ enzyme repeat protein Tax=uncultured marine microorganism HF4000_APKG8K5 RepID=B3TB54_9ZZZZ
Putative PQQ enzyme repeat protein {ECO:0000313|EMBL:ABZ09819.1}; species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG8K5.;"
PQQ enzyme repeat protein
PLM3_60_coex_sep16_scaffold_10_71
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82569..83129
DNA (561bp) protein (187aa)
Putative cytochrome c Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JHV7_HYPSM
cytochrome c
Putative cytochrome c {ECO:0000313|EMBL:CCB66959.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
PLM3_60_coex_sep16_scaffold_10_72
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83137..84084)
DNA (948bp) protein (316aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI000362CAB9
Ankyrin repeat-containing protein
Tax=RBG_16_Alphaproteobacteria_64_48_curated
PLM3_60_coex_sep16_scaffold_10_73
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84156..84410)
DNA (255bp) protein (85aa)
Benzoate transport protein Tax=alpha proteobacterium BAL199 RepID=A8TJ27_9PROT
Benzoate transporter {ECO:0000313|EMBL:KGM34295.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
Benzoate transport protein
PLM3_60_coex_sep16_scaffold_10_74
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84470..85501
DNA (1032bp) protein (344aa)
hypothetical protein Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003715452
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAO40152.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
ECF subfamily RNA polymerase sigma-24 factor
PLM3_60_coex_sep16_scaffold_10_75
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85494..86081
DNA (588bp) protein (196aa)
hypothetical protein Tax=Sphingobium chinhatense RepID=UPI000382441A
Uncharacterized protein {ECO:0000313|EMBL:KCZ92871.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsonii MHS-2.;"
ferritin
PLM3_60_coex_sep16_scaffold_10_76
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86295..86525
DNA (231bp) protein (77aa)
Cytochrome c2 Tax=Caulobacter sp. AP07 RepID=J2G8F3_9CAUL
Cytochrome c2 {ECO:0000313|EMBL:EJL26015.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
cytochrome C
PLM3_60_coex_sep16_scaffold_10_77
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


86771..87553
DNA (783bp) protein (261aa)
30S ribosomal protein S2 Tax=Elioraea tepidiphila RepID=UPI0003799434
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
rpsB; 30S ribosomal protein S2
PLM3_60_coex_sep16_scaffold_10_78
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87637..88530
DNA (894bp) protein (298aa)
Elongation factor Ts Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=EFTS_RHOCS
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
tsf; elongation factor Ts
PLM3_60_coex_sep16_scaffold_10_79
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88710..89459
DNA (750bp) protein (250aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Uridylate kinase Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LU92_9PROT
uridylate kinase
PLM3_60_coex_sep16_scaffold_10_80
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89468..90028
DNA (561bp) protein (187aa)
ribosome recycling factor Tax=Fodinicurvata sediminis RepID=UPI0003B5F390
frr; ribosome recycling factor
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_60_coex_sep16_scaffold_10_81
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90030..90761
DNA (732bp) protein (244aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
Isoprenyl transferase Tax=Phaeospirillum fulvum MGU-K5 RepID=S9S9Y1_PHAFV
UDP pyrophosphate synthase
PLM3_60_coex_sep16_scaffold_10_82
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90745..91560
DNA (816bp) protein (272aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SF50_PHAFV
PLM3_60_coex_sep16_scaffold_10_83
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91700..92848
DNA (1149bp) protein (383aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031, ECO:0000313|EMBL:CCC97896.1}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031, ECO:0000313|EMBL:CCC97896.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Zinc metalloprotease Tax=Azospirillum brasilense Sp245 RepID=G8AKY4_AZOBR
zinc metalloprotease
PLM3_60_coex_sep16_scaffold_10_84
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92880..95162
DNA (2283bp) protein (761aa)
Outer membrane protein assembly factor BamA Tax=Azospirillum brasilense Sp245 RepID=G8AKY5_AZOBR
membrane protein
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
PLM3_60_coex_sep16_scaffold_10_85
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95166..95717
DNA (552bp) protein (184aa)
Outer membrane protein Tax=Glaciecola lipolytica E3 RepID=K6YSV5_9ALTE
Outer membrane protein {ECO:0000313|EMBL:GAC14365.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" source="Aliiglaciecola lipolytica E3.;"
ompH; hypothetical protein
PLM3_60_coex_sep16_scaffold_10_86
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95811..96263
DNA (453bp) protein (151aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Tax=Magnetospirillum sp. SO-1 RepID=M2YCU5_9PROT
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase
Displaying items 61-90 of 148 in total

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