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PLM3_60_coex_sep16_scaffold_10

Search features with annotation key words

Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_10_1
unknown

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1..657
DNA (657bp) protein (219aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_10_2
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(596..1990)
DNA (1395bp) protein (465aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI00035DE5A5
hemL-2; glutamate-1-semialdehyde-2,1-aminomutase
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM3_60_coex_sep16_scaffold_10_3
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2218..3198
DNA (981bp) protein (327aa)
TetR family transcriptional regulator Tax=Oceanibaculum indicum P24 RepID=K2JM43_9PROT
TetR family transcriptional regulator {ECO:0000313|EMBL:EKE76398.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
TetR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_10_4
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3220..5355
DNA (2136bp) protein (712aa)
Acetyl-CoA synthetase, putative Tax=Burkholderia cepacia GG4 RepID=J7JA17_BURCE
acetyl-CoA synthetase
Acetyl-CoA synthetase, putative {ECO:0000313|EMBL:AFQ51112.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia GG4.;"
PLM3_60_coex_sep16_scaffold_10_5
Psychrobacter sp. G, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5400..6569
DNA (1170bp) protein (390aa)
Uncharacterized protein Tax=Psychrobacter sp. G RepID=S4YXE4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP50044.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. G.;"
PLM3_60_coex_sep16_scaffold_10_6
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6761..7003)
DNA (243bp) protein (81aa)
Transcriptional regulator AsnC family Tax=Azospirillum amazonense Y2 RepID=G1Y0V8_9PROT
Transcriptional regulator AsnC family {ECO:0000313|EMBL:EGY00848.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
putative transcription regulator, AsnC family
PLM3_60_coex_sep16_scaffold_10_7
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7092..8669)
DNA (1578bp) protein (526aa)
ATP-dependent RNA helicase Tax=Azospirillum brasilense Sp245 RepID=G8AQ03_AZOBR
DNA helicase
DNA helicase {ECO:0000313|EMBL:AIB13754.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
PLM3_60_coex_sep16_scaffold_10_8
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8871..9419
DNA (549bp) protein (183aa)
Nicotinamidase-like amidase Tax=Phaeospirillum fulvum MGU-K5 RepID=S9S853_PHAFV
Nicotinamidase-like amidase {ECO:0000313|EMBL:EPY00839.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
nicotinamidase-like amidase
PLM3_60_coex_sep16_scaffold_10_9
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9429..9986)
DNA (558bp) protein (186aa)
Uncharacterized protein {ECO:0000313|EMBL:EWY39610.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
PLM3_60_coex_sep16_scaffold_10_10
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10115..11260)
DNA (1146bp) protein (382aa)
hypothetical protein Tax=Geminocystis herdmanii RepID=UPI000348A405
alkyl hydroperoxide reductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_60_coex_sep16_scaffold_10_11

Not on your lists

comp(11439..14678)
DNA (3240bp) protein (1080aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2AJT1_9BACT
hemolysin-type calcium-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EKD61937.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM3_60_coex_sep16_scaffold_10_12
Marinobacter santoriniensis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15490..16956
DNA (1467bp) protein (489aa)
LuxR family transcriptional regulator Tax=Marinobacter santoriniensis NKSG1 RepID=M7D2D4_9ALTE
LuxR family transcriptional regulator {ECO:0000313|EMBL:EMP54903.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter santoriniensis NKSG1.;"
putative LuxR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_10_13
unknown

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comp(16772..17443)
DNA (672bp) protein (224aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_10_14
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17794..20298
DNA (2505bp) protein (835aa)
Uncharacterized protein Tax=Labrenzia RepID=U7GHV9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ERP96798.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
PLM3_60_coex_sep16_scaffold_10_15
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20858..22852)
DNA (1995bp) protein (665aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
DNA topoisomerase 4 subunit B Tax=Azospirillum sp. (strain B510) RepID=D3NV50_AZOS1
parE; topoisomerase IV subunit B
PLM3_60_coex_sep16_scaffold_10_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23047..24276)
DNA (1230bp) protein (410aa)
hypothetical protein Tax=beta proteobacterium L13 RepID=UPI000360EACF
hypothetical protein
Variovorax paradoxus strain MEDvA23 contig_89, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21239.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
PLM3_60_coex_sep16_scaffold_10_17
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24328..24708)
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HQB6_CYAP4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL47513.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
PLM3_60_coex_sep16_scaffold_10_18
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24922..25371
DNA (450bp) protein (150aa)
acyl-CoA thioester hydrolase, putative (EC:3.1.2.-)
Acyl-CoA thioester hydrolase, putative Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMV8_RHOCS
Acyl-CoA thioester hydrolase {ECO:0000313|EMBL:KGM32255.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
PLM3_60_coex_sep16_scaffold_10_19
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25428..26015
DNA (588bp) protein (196aa)
Cell wall hydrolase SleB Tax=Thiorhodococcus drewsii AZ1 RepID=G2DX84_9GAMM
Cell wall hydrolase SleB {ECO:0000313|EMBL:EGV33438.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
cell wall hydrolase
PLM3_60_coex_sep16_scaffold_10_20
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26113..27522)
DNA (1410bp) protein (470aa)
glnA2; glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356, ECO:0000313|EMBL:CCG09659.1}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356, ECO:0000313|EMBL:CCG09659.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
Glutamine synthetase Tax=Rhodospirillum photometricum DSM 122 RepID=H6SQE0_RHOPH
PLM3_60_coex_sep16_scaffold_10_21
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27578..27916)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein PII Tax=Magnetospirillum RepID=Q2W9H6_MAGSA
nitrogen regulatory protein PII
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:KIL97216.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
PLM3_60_coex_sep16_scaffold_10_22

Not on your lists

28158..29096
DNA (939bp) protein (313aa)
Lipolytic enzyme {ECO:0000313|EMBL:AFB82697.1}; EC=3.1.1.- {ECO:0000313|EMBL:AFB82697.1};; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Lipolytic enzyme Tax=uncultured bacterium RepID=H6BDX3_9BACT
alpha/beta hydrolase fold-3 domain-containing protein
PLM3_60_coex_sep16_scaffold_10_23
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29140..30321)
DNA (1182bp) protein (394aa)
Class I and II aminotransferase Tax=Oceanibaculum indicum P24 RepID=K2KK67_9PROT
Aspartate aminotransferase {ECO:0000313|EMBL:KHQ51857.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
Aminotransferase class I/II
PLM3_60_coex_sep16_scaffold_10_trna_1
unknown

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30518..30591
DNA (74bp)
transferRNA His
PLM3_60_coex_sep16_scaffold_10_24
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30687..31091
DNA (405bp) protein (135aa)
Alternative dihydrofolate reductase 3 Tax=Caenispirillum salinarum AK4 RepID=K9H3A0_9PROT
Conserved protein {ECO:0000313|EMBL:GAK44806.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_10_25
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31170..32531
DNA (1362bp) protein (454aa)
Sel1 domain protein repeat-containing protein Tax=Thalassiobium sp. R2A62 RepID=C7DAE5_9RHOB
Sel1 domain-containing protein repeat-containing protein
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
PLM3_60_coex_sep16_scaffold_10_26
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32618..34051
DNA (1434bp) protein (478aa)
Putative uncharacterized protein Tax=Azospirillum brasilense RepID=B5ANZ9_AZOBR
conserved protein of unknown function; putative Carbohydrate kinase domain
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM3_60_coex_sep16_scaffold_10_27
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34314..34568
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:EWY42353.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
PLM3_60_coex_sep16_scaffold_10_trna_2
unknown

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34739..34820
DNA (82bp)
transferRNA Leu
PLM3_60_coex_sep16_scaffold_10_28
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34913..36253
DNA (1341bp) protein (447aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
trigger factor Tax=Fodinicurvata sediminis RepID=UPI0003B39B61
tig; trigger factor
Displaying items 1-30 of 148 in total

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