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PLM3_60_coex_sep16_scaffold_10

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Displaying items 121-148 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_10_117
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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135031..136347
DNA (1317bp) protein (439aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
Dihydrolipoamide acetyltransferase, long form Tax=Rhodospirillum rubrum RepID=G2TAI6_RHORU
dihydrolipoamide acetyltransferase
PLM3_60_coex_sep16_scaffold_10_118
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136357..136728
DNA (372bp) protein (124aa)
Cupin 2 conserved barrel domain protein Tax=Burkholderia sp. (strain CCGE1002) RepID=D5W5A2_BURSC
cupin
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
PLM3_60_coex_sep16_scaffold_10_119
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136731..138131
DNA (1401bp) protein (467aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Dihydrolipoyl dehydrogenase Tax=Oceanibaculum indicum P24 RepID=K2KK27_9PROT
dihydrolipoamide dehydrogenase
PLM3_60_coex_sep16_scaffold_10_120
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138135..139091
DNA (957bp) protein (319aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
lipA; lipoyl synthase (EC:2.8.1.-)
Lipoyl synthase Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=LIPA_RHOCS
PLM3_60_coex_sep16_scaffold_10_121
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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139101..139556
DNA (456bp) protein (152aa)
Oligoketide cyclase/lipid transport protein Tax=Oceanibaculum indicum P24 RepID=K2JQX5_9PROT
Oligoketide cyclase/lipid transport protein {ECO:0000313|EMBL:EKE77668.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
putative oligoketide cyclase/dehydratase
PLM3_60_coex_sep16_scaffold_10_122
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(139546..140208)
DNA (663bp) protein (221aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6C2_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ37660.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_60_coex_sep16_scaffold_10_123
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140345..140839)
DNA (495bp) protein (165aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00038049E9
Uncharacterized protein {ECO:0000313|EMBL:EKE77667.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
cinA; competence/damage-inducible protein CinA
PLM3_60_coex_sep16_scaffold_10_124
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(140843..142075)
DNA (1233bp) protein (411aa)
Bifunctional enzyme IspD/IspF Tax=Azospirillum brasilense Sp245 RepID=G8AQ19_AZOBR
ispDF; bifunctional: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
PLM3_60_coex_sep16_scaffold_10_125
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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142093..142878
DNA (786bp) protein (262aa)
Uncharacterized 28.8 kDa protein in nifR3-like 5'region Tax=Azospirillum brasilense RepID=YNR3_AZOBR
hypothetical protein
Uncharacterized 28.8 kDa protein in nifR3-like 5'region; ORF5; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
PLM3_60_coex_sep16_scaffold_10_126
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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142973..143959
DNA (987bp) protein (329aa)
tRNA-dihydrouridine synthase Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6T1_AZOL4
dusB; tRNA-dihydrouridine synthase B
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_60_coex_sep16_scaffold_10_127
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143974..145098
DNA (1125bp) protein (375aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
ntrB; Nitrogen regulation protein NtrB (EC:2.7.3.-)
Signal transduction histidine kinase Tax=Oceanibaculum indicum P24 RepID=K2J3X0_9PROT
PLM3_60_coex_sep16_scaffold_10_128
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145101..146546
DNA (1446bp) protein (482aa)
Nitrogen assimilation regulatory protein NtrC Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IQ42_RHOCS
ntrC; Nitrogen assimilation regulatory protein NtrC
Nitrogen assimilation regulatory protein NtrC {ECO:0000313|EMBL:ACI97578.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM3_60_coex_sep16_scaffold_10_129
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146608..148875
DNA (2268bp) protein (756aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
ntrY; Nitrogen regulation protein NtrY (EC:2.7.3.-)
Nitrogen regulation protein NtrY Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IQ43_RHOCS
PLM3_60_coex_sep16_scaffold_10_130
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148865..150277
DNA (1413bp) protein (471aa)
Response regulator containing CheY-like receiver Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W4Q2_MAGSA
response regulator containing CheY-like receiver
Response regulator containing CheY-like receiver {ECO:0000313|EMBL:BAE51173.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
PLM3_60_coex_sep16_scaffold_10_131
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150332..151180
DNA (849bp) protein (283aa)
D-amino acid aminotransferase Tax=Fodinicurvata sediminis RepID=UPI0003B74A49
Aminotransferase, class IV {ECO:0000313|EMBL:EDP63613.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
class IV aminotransferase
PLM3_60_coex_sep16_scaffold_10_132
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151167..151859
DNA (693bp) protein (231aa)
Phosphoglycolate phosphatase (EC:3.1.3.18)
HAD family hydrolase Tax=Fodinicurvata sediminis RepID=UPI0003B3728E
HAD family hydrolase {ECO:0000313|EMBL:KJB93586.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
PLM3_60_coex_sep16_scaffold_10_133
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151967..152218
DNA (252bp) protein (84aa)
RNA-binding protein Hfq Tax=Fodinicurvata sediminis RepID=UPI0003B60269
hfq; host factor-I protein
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
PLM3_60_coex_sep16_scaffold_10_134
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152220..153566
DNA (1347bp) protein (449aa)
GTPase HflX Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W4P8_MAGSA
GTPase
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
PLM3_60_coex_sep16_scaffold_10_135
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153581..154405
DNA (825bp) protein (275aa)
suhB; inositol-1-monophosphatase (EC:3.1.3.25)
Inositol-1-monophosphatase, putative {ECO:0000313|EMBL:ACI97587.1}; EC=3.1.3.25 {ECO:0000313|EMBL:ACI97587.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Inositol-1-monophosphatase, putative Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IQ51_RHOCS
PLM3_60_coex_sep16_scaffold_10_136
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154460..155338
DNA (879bp) protein (293aa)
NAD-binding 6-phosphogluconate dehydrogenase Tax=Thalassospira profundimaris WP0211 RepID=K2LDF4_9PROT
NAD-binding 6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:EKF08076.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
NAD-binding 6-phosphogluconate dehydrogenase
PLM3_60_coex_sep16_scaffold_10_137
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155350..156174)
DNA (825bp) protein (275aa)
Nucleoside triphosphate pyrophosphohydrolase Tax=Azospirillum brasilense Sp245 RepID=G8AQ40_AZOBR
mazG; nucleoside triphosphate pyrophosphohydrolase
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:CCC99551.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
PLM3_60_coex_sep16_scaffold_10_138
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156361..157137)
DNA (777bp) protein (259aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI00036BBC4C
putative Metal-dependent hydrolase
Putative Metal-dependent hydrolase {ECO:0000313|EMBL:CBS86999.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
PLM3_60_coex_sep16_scaffold_10_139
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157140..157937)
DNA (798bp) protein (266aa)
Hydrolase, TatD family Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11HZ6_MESSB
TatD family hydrolase {ECO:0000313|EMBL:GAK46752.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
TatD family hydrolase
PLM3_60_coex_sep16_scaffold_10_140
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(157953..159503)
DNA (1551bp) protein (517aa)
methionine--tRNA ligase (EC:6.1.1.10)
Methionine--tRNA ligase Tax=Azospirillum brasilense Sp245 RepID=G8ALW5_AZOBR
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
PLM3_60_coex_sep16_scaffold_10_141
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159579..160640)
DNA (1062bp) protein (354aa)
DNA polymerase III subunit delta' (EC:2.7.7.7)
ATPase involved in DNA replication Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W4H2_MAGSA
ATPase involved in DNA replication {ECO:0000313|EMBL:BAE51253.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
PLM3_60_coex_sep16_scaffold_10_142
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160643..161296)
DNA (654bp) protein (218aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
Thymidylate kinase Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7P4_AZOL4
tmk; thymidylate kinase
PLM3_60_coex_sep16_scaffold_10_143
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161334..162479)
DNA (1146bp) protein (382aa)
D-alanyl-D-alanine carboxypeptidase Tax=Azospirillum brasilense Sp245 RepID=G8ALW2_AZOBR
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:KJB93602.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
D-Ala-D-Ala carboxypeptidase
PLM3_60_coex_sep16_scaffold_10_144
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162613..163587)
DNA (975bp) protein (325aa)
Rare lipoprotein A Tax=Magnetospirillum gryphiswaldense RepID=A4U1D4_9PROT
putative Rare lipoprotein A
Putative Rare lipoprotein A {ECO:0000313|EMBL:CDK98342.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Displaying items 121-148 of 148 in total

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