ggKbase home page

PLM3_60_coex_sep16_scaffold_3_34

Organism: PLM3_60_coex_sep16_Magnetospirillum_magneticum_63_15

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 ASCG 10 / 38 MC: 1
Location: 36626..37498

Top 3 Functional Annotations

Value Algorithm Source
Ornithine carbamoyltransferase {ECO:0000313|EMBL:ABS63168.1}; EC=2.1.3.3 {ECO:0000313|EMBL:ABS63168.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 273.0
  • Bit_score: 302
  • Evalue 6.40e-79
spermidine/putrescine ABC transporter permease Tax=Fodinicurvata sediminis RepID=UPI0003B38217 similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 282.0
  • Bit_score: 317
  • Evalue 1.40e-83
ornithine carbamoyltransferase similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 273.0
  • Bit_score: 302
  • Evalue 1.30e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGGCCCAGGCAACCACCGCAGGCGCCGCCGCCGCGAAATCGGTGCAACATGTCAGCAAGCCGTTGCCGCTGGAATATCTGCGCAAGCGCTGGCTGCAGGCGGTGGTGCTCTTCGGTTTCTTCTTTCTCTATTTCCCGATCATCGCGCTGATGGCCACCTCGTTCAACGAGGACAAGCGCAACATCACCTGGAAGGGCTTCACCACCGATTGGTATGTCAAGGCTTACAACGATGCTTCGTTATTCAACGCCCTGGTAAACAGCCTGACCGTCGCTGTCGTTTCCACGATCGTATCGACGATCATCGGAACCATGCTCGGTTTGGCGCTCTACCGATACCGCTTTCCCAACAAAGCGTCGTTTGAGAGCATCGCGTATCTGCCGATCGTCATCCCCGAGATCTCGATGGCGGTGGCCATGCTGGCTTACTTCGCGCAATTCCTGGAAGTGCCGCTGGGGCTGTTCACGATCACCGTCAGCCACATCGCTTTCAGTTTTCCATTCGTCGCCGTCGTGGTCCGCACGCGCATGGCGGGCTTCGACGAGTCGTTGGAAGAGGCGTCGCGCGACCTGGGCGCCAGCGGCCAACAGACTTTCTGGAATGTCACCGTTCCCTACATGATGCCGGGAATCATCGCGGGCGCTCTGCTGGCCTTTACCCTGTCGCTGGACGATTTCGTCATCACCCAATTCACGTCCGGTCCGGGCTCCACGACGCTGCCCATCAAGATCTATTCCATGGTGCGCTTCAGCGTCACGCCGACGGTCAATGCCGCCTCGACAGTGCTCATTGTCATCACTCTCACCGTTGCGGTTGCGGCCATGGCCATGCAAGCGCGCAGCGAGAAAAACATGGTCAAGAAAAATGGATAG
PROTEIN sequence
Length: 291
MAQATTAGAAAAKSVQHVSKPLPLEYLRKRWLQAVVLFGFFFLYFPIIALMATSFNEDKRNITWKGFTTDWYVKAYNDASLFNALVNSLTVAVVSTIVSTIIGTMLGLALYRYRFPNKASFESIAYLPIVIPEISMAVAMLAYFAQFLEVPLGLFTITVSHIAFSFPFVAVVVRTRMAGFDESLEEASRDLGASGQQTFWNVTVPYMMPGIIAGALLAFTLSLDDFVITQFTSGPGSTTLPIKIYSMVRFSVTPTVNAASTVLIVITLTVAVAAMAMQARSEKNMVKKNG*