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PLM3_60_coex_sep16_scaffold_3

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Displaying items 31-60 of 157 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3_30
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30839..32401
DNA (1563bp) protein (521aa)
PREDICTED: arylsulfatase K-like Tax=Pantholops hodgsonii RepID=UPI0003C16A19
Uncharacterized protein {ECO:0000313|EMBL:KGM30881.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
sulfatase
PLM3_60_coex_sep16_scaffold_3_31
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32593..34230
DNA (1638bp) protein (546aa)
Na/Pi cotransporter II-related protein Tax=alpha proteobacterium BAL199 RepID=A8TK00_9PROT
Na/Pi cotransporter II-related protein {ECO:0000313|EMBL:EDP66936.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
putative Na+/phosphate transporter
PLM3_60_coex_sep16_scaffold_3_32
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34447..35517
DNA (1071bp) protein (357aa)
spermidine/putrescine ABC transporter substrate-binding protein Tax=Fodinicurvata sediminis RepID=UPI0003B3F603
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
extracellular solute-binding protein
PLM3_60_coex_sep16_scaffold_3_33
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35717..36622
DNA (906bp) protein (302aa)
ABC-type spermidine/putrescine transport system, permease component I Tax=Caulobacter crescentus OR37 RepID=R0CXX1_CAUCE
ABC-type spermidine/putrescine transport system, permease component I {ECO:0000313|EMBL:ENZ81331.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
binding-protein-dependent transport system inner membrane protein
PLM3_60_coex_sep16_scaffold_3_34
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36626..37498
DNA (873bp) protein (291aa)
Ornithine carbamoyltransferase {ECO:0000313|EMBL:ABS63168.1}; EC=2.1.3.3 {ECO:0000313|EMBL:ABS63168.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
spermidine/putrescine ABC transporter permease Tax=Fodinicurvata sediminis RepID=UPI0003B38217
ornithine carbamoyltransferase
PLM3_60_coex_sep16_scaffold_3_35
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37491..38582
DNA (1092bp) protein (364aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
putrescine/spermidine ABC transporter ATP-binding protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002626332
spermidine/putrescine ABC transporter ATPase
PLM3_60_coex_sep16_scaffold_3_36
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38831..40825)
DNA (1995bp) protein (665aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI00035DBB4D
hypothetical protein
Tax=BJP_08E140C01_Syntrophobacterales_43_19
PLM3_60_coex_sep16_scaffold_3_37
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40981..41568
DNA (588bp) protein (196aa)
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
PREDICTED: dTDP-4-dehydrorhamnose 3,5-epimerase-like Tax=Amphimedon queenslandica RepID=UPI00021A578B
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:KJS40067.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
PLM3_60_coex_sep16_scaffold_3_38
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41575..42657
DNA (1083bp) protein (361aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
dTDP-glucose 4,6-dehydratase Tax=Citromicrobium sp. JLT1363 RepID=UPI000225DF89
rfbB; dTDP-D-glucose 4,6-dehydratase
PLM3_60_coex_sep16_scaffold_3_39
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42654..43535
DNA (882bp) protein (294aa)
dTDP-4-dehydrorhamnose reductase Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZJ51_AZOL4
dTDP-4-dehydrorhamnose reductase
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AIB16642.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
PLM3_60_coex_sep16_scaffold_3_40
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43542..44429
DNA (888bp) protein (296aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Glucose-1-phosphate thymidylyltransferase Tax=Oceanibaculum indicum P24 RepID=K2J2R6_9PROT
glucose-1-phosphate thymidylyltransferase
PLM3_60_coex_sep16_scaffold_3_41
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44449..45975)
DNA (1527bp) protein (509aa)
histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Histidine ammonia-lyase Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AA51_STAND
PLM3_60_coex_sep16_scaffold_3_42
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46203..47108)
DNA (906bp) protein (302aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:CDY74275.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CDY74275.1};; Short-chain dehydrogenase {ECO:0000313|EMBL:KDR43928.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
Putative oxidoreductase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7W0_ANADF
short chain dehydrogenase
PLM3_60_coex_sep16_scaffold_3_43
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47205..47783
DNA (579bp) protein (193aa)
Transcriptional regulator, repressor protein MphR(A) Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJH3_9RHIZ
Transcriptional regulator, repressor protein MphR(A) {ECO:0000313|EMBL:EHK59138.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator, repressor protein MphR(A)
PLM3_60_coex_sep16_scaffold_3_44
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48140..49747
DNA (1608bp) protein (536aa)
ABC-type dipeptide transport system, periplasmic component Tax=Phyllobacterium sp. YR531 RepID=J3HKI9_9RHIZ
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EJM98435.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
peptide ABC transporter substrate-binding protein
PLM3_60_coex_sep16_scaffold_3_45
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49821..50810
DNA (990bp) protein (330aa)
UPI0003CE295F related cluster Tax=unknown RepID=UPI0003CE295F
ABC transporter permease {ECO:0000313|EMBL:ESW89800.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
binding-protein-dependent transport systems inner membrane component
PLM3_60_coex_sep16_scaffold_3_46
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50807..51637
DNA (831bp) protein (277aa)
Nickel transporter subunit membrane component of ABC superfamily Tax=Mesorhizobium sp. STM 4661 RepID=M5F525_9RHIZ
Nickel transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CCV11416.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
ABC transporter permease
PLM3_60_coex_sep16_scaffold_3_47
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51634..52479
DNA (846bp) protein (282aa)
Putative ATP-binding component of ABC transporter Tax=Nitratireductor aquibiodomus RA22 RepID=I5BXA1_9RHIZ
Putative ATP-binding component of ABC transporter {ECO:0000313|EMBL:EIM74203.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
putative ATP-binding component of ABC transporter
PLM3_60_coex_sep16_scaffold_3_48
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52472..53254
DNA (783bp) protein (261aa)
ABC transporter Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4M3_9RHIZ
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB82418.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
ATPase component of various ABC-type transport systems with duplicated ATPase domain
PLM3_60_coex_sep16_scaffold_3_trna_3
unknown

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comp(53448..53520)
DNA (73bp)
transferRNA Phe
PLM3_60_coex_sep16_scaffold_3_49
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(53868..55118)
DNA (1251bp) protein (417aa)
Ribonuclease E Tax=Vibrio azureus NBRC 104587 RepID=U3A257_9VIBR
ribonuclease
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3_50
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55115..55633)
DNA (519bp) protein (173aa)
Maf-like protein AZOBR_p1120027 Tax=Azospirillum brasilense Sp245 RepID=G8ATG8_AZOBR
septum formation inhibitor Maf
Maf-like protein ABAZ39_20550 {ECO:0000256|HAMAP-Rule:MF_00528}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
PLM3_60_coex_sep16_scaffold_3_51
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55785..56003)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INF1_RHOCS
infA; Translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
PLM3_60_coex_sep16_scaffold_3_52
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56101..56505)
DNA (405bp) protein (135aa)
Arsenate reductase Tax=Caenispirillum salinarum AK4 RepID=K9H9I8_9PROT
ArsC family transcriptional regulator {ECO:0000313|EMBL:KJS37568.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
arsC; low molecular weight phosphotyrosine protein phosphatase
PLM3_60_coex_sep16_scaffold_3_53
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56553..57041)
DNA (489bp) protein (163aa)
UPF0262 protein P24_04370 Tax=Oceanibaculum indicum P24 RepID=K2JS05_9PROT
UPF0262 protein P24_04370 {ECO:0000256|HAMAP-Rule:MF_00678}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3_54
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57159..57683)
DNA (525bp) protein (175aa)
hypothetical protein Tax=Fodinicurvata sediminis RepID=UPI0003B7B61F
Uncharacterized protein {ECO:0000313|EMBL:KJR67104.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3_55
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57680..58954)
DNA (1275bp) protein (425aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=MURA_RHOCS
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
PLM3_60_coex_sep16_scaffold_3_56
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58996..59550)
DNA (555bp) protein (185aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000313|EMBL:AJP71584.1}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000313|EMBL:AJP71584.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
deoxycytidine triphosphate deaminase Tax=Sphingopyxis baekryungensis RepID=UPI0003B5BEBD
PLM3_60_coex_sep16_scaffold_3_trna_1
unknown

Not on your lists

60120..60191
DNA (72bp)
transferRNA Thr
PLM3_60_coex_sep16_scaffold_3_57
unknown

Not on your lists

comp(60339..60581)
DNA (243bp) protein (81aa)

This feature has no annotations

Displaying items 31-60 of 157 in total

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