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PLM3_60_coex_sep16_scaffold_1068_5

Organism: PLM3_60_coex_sep16_Magnetospirillum_magneticum_63_15

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 ASCG 10 / 38 MC: 1
Location: comp(3450..7625)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:KJB92491.1};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 1389.0
  • Bit_score: 2235
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' Tax=Azospirillum brasilense Sp245 RepID=G8AEM3_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 1387.0
  • Bit_score: 2228
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 1387.0
  • Bit_score: 2229
  • Evalue 0.0

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4176
ATGAACGAGCTGATGAATCTGTTCGGCCAGCAGGCCGAAACCCAGAAATTCGATCAGATCCGGATCTCCATTGCCAGCCCGGAGCGTATCCGCTCCTGGTCCTTCGGCGAGATCAAAAAGCCGGAGACCATCAACTACCGGACCTTCAAGCCCGAACGGGACGGACTGTTCTGCGCCCGCATCTTTGGTCCGATCAAGGATTACGAATGCTTGTGCGGCAAGTACAAGCGCATGAAGTATCGCGGCATCATCTGCGAAAAGTGCGGCGTGGAAGTCACGCTTTCGAAGGTGCGGCGCGAGCGCATGGGCCATATCGAGCTGGCCTCGCCGGTGGCGCATATCTGGTTCCTGAAGTCGCTGCCCAGCCGCATCGGCTTGCTGATGGACATGACGCTGAAGGATCTGGAGCGGGTGCTCTATTTCGAAAGCTACATGGTCCTCGAGCCGGGCCTGACGCCGCTGAAGCCGAACCAGCTTCTGACGGAAGAGCAGTATCTCAACGCCCAGGATGAATTCGGCGAGGATGCCTTCCAGGCCTCCATCGGCGCCGAGGCGCTGAAGAAGATGCTGGTGCAGATCGATCTCGAAACCGAGAAGGCGCGCATGCGCGTCGAGTTGCGGGAGACCAACTCCGAGGCCAAGCGCAAGAAGCTGGTGAAGCGGCTGAAGACGGTCGAGTCCTTCATCGAATCCGGCAGCCGGCCGGAATGGATGATCCTGGATGTCGTGCCGGTGATTCCGCCGGAACTGCGGCCCCTGGTGCCGCTGGATGGCGGCCGCTTTGCGACCTCGGACCTCAACGATCTCTACCGCCGCGTCATCAACCGCAACAACCGACTGAAGCGGCTGATCGAACTGCGCGCGCCCGATATCATCGTGCGCAACGAGAAGCGCATGTTGCAGGAAGCGGTGGATGCGCTGTTCGACAACGGCCGCCGCGGCCGCGTCATCACCGGCGCCAACAAGCGGCCGCTGAAGTCGCTGTCCGACATGCTGAAGGGCAAGCAGGGCCGCTTCCGCCAGAATCTGCTGGGCAAGCGCGTCGACTATTCCGGCCGTTCGGTGATCGTGGTCGGTCCCGAGCTCAAGCTGCATCAGTGCGGTTTGCCGAAGAAGATGGCGTTGGAGCTGTTCAAGCCGTTCATCTACTCGAAGCTGGAACTCTACGGCATGGCCAGCACCATCAAGGCGGCGCGCCGCATGGTGGAGAAGGAGCGTCCGGAGGTCTGGGACATCCTGGAAGAGGTCATCCGTGAACATCCGGTGCTGCTGAACCGGGCGCCGACGCTGCACCGCCTGGGCATCCAGGCATTCGAGCCGGTGCTGATCGAAGGCAAGGCGATCCAGCTGCATCCGCTGGTCTGCACCGCCTTCAACGCCGACTTCGACGGCGACCAGATGGCGGTCCATGTGCCGCTGTCGCTGGAAGCCCAACTCGAAGCCCGCGTGCTGATGATGTCGACCAACAACATCCTCTCGCCCGCCAACGGCAAGCCGATCATCGTGCCGAGCCAGGACATCGTGCTCGGCCTCTACTACCTCACGATGGAAGGCAAGGACGAACCGGGCGCCGGCATGGCGTTCGGCGATATCGGCGAGATCCAGCATGCGTTGGAGGCCAAGGCGATCACGCTGCATTCGCCGATCAAGGCGCGCTACAGCTCGCCGAAAGCCGACGGCAAGATGCATACCCGGGTTGTGAACACGACCGCCGGGCGCATGCTGCTGGCGCAGATCCTGCCGAAGAGCCCGATCATCTCCCTCGACCTGGTCAACCGCCTGCTGACCAAGAAAGAGATCACCAACGTCATCGATATCGTCTACCGCCATTGCGGCCAGAAGGAGACGGTGATTTTCGCCGATCGCATGATGGGCCTCGGCTTCAGCCACGCCTGCCGCGCCGGCATCTCCTTCGGCAAGGACGATCTGATCATCCCGAAGGCGAAGGAAAAGCTGGTCAGCGACGCGCAGAAGAAGGTGAAGGAGTACGAGCAGCAATATCTCGACGGCCTGATCACCCAGGGCGAAAAGTACAACAAGGTGGTCGACGTCTGGTCGAACTGCACGGAGCGGGTGGCCGACGAGATGATGAAGGTGATGTCGGAGAAGGCCTCCGGCGCCAACATCAACTCGGTGTTCATGATGGCCCATTCCGGCGCCCGCGGTTCCGCGGCGCAGATCAAGCAGCTGGCGGGCATGCGCGGCCTGATGGCCAAGCCGTCCGGCGAGATCATCGAGACGCCGATTATCTCGAACTTCAAGGAAGGCCTGACCGTGCTCGAGTACTTCAACTCGACTCACGGCGCCCGCAAGGGTCTGGCCGATACCGCGCTGAAGACGGCGAACTCCGGGTATCTGACGCGGCGTCTTGTCGACGTGGCGCAGGATGCCATCGTCACCCAGGACGAGTGCGGCACGGTCAACGGCTTGTCGGTCAAGGCGGTGGTCGAAGGCGGCGAAGTTATCGCCTCGCTTTCTGAGCGCATCCTCGGCCGCAGCGCGGCCGTGGACATCGTCGATCCCCTGAGCTCGACCGTGATCGTCAAGGCCGGCGAGTTGATCGACGAAGAGAAAGTGGAACGCATCGACAAGGCCGGCATCGACACCGTGATCATCCGATCGGTGCTGACCTGCGAGTCGCGCAACGGCATTTGCGCCCGCTGCTATGGCCGCGATCTCGCGCGCGGCACGCCGGTCAATATCGGCGAGGCGATCGGCGTGATCGCCGCGCAGTCGATCGGCGAACCCGGCACCCAGCTCACAATGCGCACCTTCCATATCGGCGGCGCGGTGCAGCGTGGCGCCGAGCAGTCGAGCGTGGAGGCCGCCATCGACGGCTTGCTGTCGATCAAGAACCGCAACGTCGTGATCAACAGCCAGGGCTTCCCCATCATCATGGGCCGCAATTGCGAGCTGGTTGTGTTGGACGACCAGAAGCGCGAACGGGCACGTCACCGCATTCCCTATGGCACAAAGATCCTGATCGACGATGGCGCCAAGGTGACCAAAGGCCAAAAGCTGGCGGAATGGGATCCCTACACCCTGCCGATCATCACCGAGAAGGAAGGCACCGTCGCCTACATGGACCTGGTGGACGGCGTCTCCATGCGCGAGGTGGTCGACGAAACGACGGGCATCTCCAGCCGCGTGGTCATCGATTGGAAGCAGCAGGCGCGCGGCGCTGACCTCAAGCCGCGTATCGTGCTGACTGACGCCAAGGGCAACCCGCTCATCCTGCCCAACGGGCTGGAAGCCCGCTACTTCATGTCGGTCGACGCCATCCTCAGCGTTGAGAACGGCGGCCATGTGAAGGCCGGCGACGTGCTGGCACGTATCCCCCGGGAGTCGTCAAAGACCAGGGACATCACCGGCGGCTTGCCGCGGGTGGCCGAACTGTTCGAGGCGCGCAAACCCAAGGACCACGCGATCATCAGCGAGATCGAAGGCCGCGTGGAATTTGGCAAGGATTACAAGAACAAGCGGCGAATTGTCGTAGTGCCCGAGGACGCCTCGGCCGAGTCCAAGGAGTACCTGATCCCCAAGGGCAAGCATATCAGCGTGCAAGAGGGCGACTACGTCGTTCGCGGCGATCTCCTGATGGACGGCAATCCGGTTCCCCACGATATCCTGCGCGTCTTGGGTATCGCGGAACTGGCGAGCTATCTGATCAACGAGATCCAGGAGGTCTATCGGCTCCAGGGCGTGAAGATCAACGACAAGCACATTGAGGTCATCGTTCGCCAGATGTTGCAGAAGGTCGAAATCACCGATCCAGGCGACACCACCTTCCTGGTGGGCGAGCAGGTGGATCGGGACGAGTTCGACGATCTCAATACCAAGGCGACGAATGAGGGCATGCGGCTGGCAGCGGGCGAGCCGGTCCTTCAGGGCATTACCAAGGCGAGCCTGCAGACCCGTTCGTTCATCTCGGCGGCGTCGTTCCAGGAGACGACCCGCGTGCTCACGGAAGCCGCCGTTTCCGGCAGGGTCGACGATCTCATCGGCCTCAAGGAAAACGTCATTGTCGGCCGCCTGATTCCGGCCGGCACGGGTGCTGTGATGAACCGGCTGAAAGCGCTGGCCGCCGCTCGCGACAAGCAACTCAGCGGCGAACAGCCGCCCGCTCTTACCAAGGACGGCAAGGAGAAGGAGCCGACCCAGACGGCCGCCGAATAG
PROTEIN sequence
Length: 1392
MNELMNLFGQQAETQKFDQIRISIASPERIRSWSFGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKYRGIICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLKSLPSRIGLLMDMTLKDLERVLYFESYMVLEPGLTPLKPNQLLTEEQYLNAQDEFGEDAFQASIGAEALKKMLVQIDLETEKARMRVELRETNSEAKRKKLVKRLKTVESFIESGSRPEWMILDVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRMLQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALELFKPFIYSKLELYGMASTIKAARRMVEKERPEVWDILEEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYLTMEGKDEPGAGMAFGDIGEIQHALEAKAITLHSPIKARYSSPKADGKMHTRVVNTTAGRMLLAQILPKSPIISLDLVNRLLTKKEITNVIDIVYRHCGQKETVIFADRMMGLGFSHACRAGISFGKDDLIIPKAKEKLVSDAQKKVKEYEQQYLDGLITQGEKYNKVVDVWSNCTERVADEMMKVMSEKASGANINSVFMMAHSGARGSAAQIKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDAIVTQDECGTVNGLSVKAVVEGGEVIASLSERILGRSAAVDIVDPLSSTVIVKAGELIDEEKVERIDKAGIDTVIIRSVLTCESRNGICARCYGRDLARGTPVNIGEAIGVIAAQSIGEPGTQLTMRTFHIGGAVQRGAEQSSVEAAIDGLLSIKNRNVVINSQGFPIIMGRNCELVVLDDQKRERARHRIPYGTKILIDDGAKVTKGQKLAEWDPYTLPIITEKEGTVAYMDLVDGVSMREVVDETTGISSRVVIDWKQQARGADLKPRIVLTDAKGNPLILPNGLEARYFMSVDAILSVENGGHVKAGDVLARIPRESSKTRDITGGLPRVAELFEARKPKDHAIISEIEGRVEFGKDYKNKRRIVVVPEDASAESKEYLIPKGKHISVQEGDYVVRGDLLMDGNPVPHDILRVLGIAELASYLINEIQEVYRLQGVKINDKHIEVIVRQMLQKVEITDPGDTTFLVGEQVDRDEFDDLNTKATNEGMRLAAGEPVLQGITKASLQTRSFISAASFQETTRVLTEAAVSGRVDDLIGLKENVIVGRLIPAGTGAVMNRLKALAAARDKQLSGEQPPALTKDGKEKEPTQTAAE*