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PLM3_60_coex_sep16_scaffold_1068

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1068_1
Reclinomonas americana, Reclinomonas, Eukaryota

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comp(2..139)
DNA (138bp) protein (46aa)
Elongation factor Tu, mitochondrial Tax=Reclinomonas americana RepID=EFTU_RECAM
Elongation factor Tu, mitochondrial; species="Eukaryota; Jakobida; Histionidae; Reclinomonas.;" source="Reclinomonas americana.;"
tuf; elongation factor Tu (EF-Tu)
PLM3_60_coex_sep16_scaffold_1068_2
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(188..2263)
DNA (2076bp) protein (692aa)
Elongation factor G Tax=Oceanibaculum indicum P24 RepID=K2IYJ9_9PROT
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
elongation factor G
PLM3_60_coex_sep16_scaffold_1068_3
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2295..2765)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 Tax=Roseomonas sp. B5 RepID=UPI0002E51DF1
rpsG; 30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
PLM3_60_coex_sep16_scaffold_1068_4
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2777..3148)
DNA (372bp) protein (124aa)
30S ribosomal protein S12 Tax=Magnetospirillum RepID=RS12_MAGSA
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
PLM3_60_coex_sep16_scaffold_1068_5
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3450..7625)
DNA (4176bp) protein (1392aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:KJB92491.1};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
DNA-directed RNA polymerase subunit beta' Tax=Azospirillum brasilense Sp245 RepID=G8AEM3_AZOBR
DNA-directed RNA polymerase subunit beta'
PLM3_60_coex_sep16_scaffold_1068_6
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7668..11840)
DNA (4173bp) protein (1391aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
DNA-directed RNA polymerase subunit beta Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=RPOB_MAGSA
PLM3_60_coex_sep16_scaffold_1068_7
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11985..12353)
DNA (369bp) protein (123aa)
50S ribosomal protein L7 Tax=Kordiimonas gwangyangensis RepID=UPI00035E9C39
50S ribosomal protein L7/L12
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
PLM3_60_coex_sep16_scaffold_1068_8
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12399..12917)
DNA (519bp) protein (173aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI0003680BF2
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
rplJ; 50S ribosomal subunit protein L10
PLM3_60_coex_sep16_scaffold_1068_9
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13259..13957)
DNA (699bp) protein (233aa)
50S ribosomal protein L1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TQ98_PHAFV
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
rplA; 50S ribosomal protein L1
PLM3_60_coex_sep16_scaffold_1068_10
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13963..14394)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 Tax=Caenispirillum salinarum AK4 RepID=K9GN79_9PROT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
50S ribosomal protein L11
PLM3_60_coex_sep16_scaffold_1068_11
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14560..15090)
DNA (531bp) protein (177aa)
Transcription termination/antitermination protein NusG Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W2H5_MAGSA
nusG; transcription antitermination protein NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
PLM3_60_coex_sep16_scaffold_1068_12
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15095..15331)
DNA (237bp) protein (79aa)
Protein translocase subunit SecE Tax=Azospirillum sp. (strain B510) RepID=D3NS25_AZOS1
hypothetical protein
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
PLM3_60_coex_sep16_scaffold_1068_trna_1
unknown

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comp(15365..15437)
DNA (73bp)
transferRNA Trp
PLM3_60_coex_sep16_scaffold_1068_13
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15496..15645)
DNA (150bp) protein (50aa)
Elongation factor Tu Tax=alpha proteobacterium BAL199 RepID=A8TWG4_9PROT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
tufB2; elongation factor Tu (EF-Tu)
Displaying 14 items

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