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PLM3_60_coex_sep16_scaffold_1068_6

Organism: PLM3_60_coex_sep16_Magnetospirillum_magneticum_63_15

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 ASCG 10 / 38 MC: 1
Location: comp(7668..11840)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 1391.0
  • Bit_score: 2223
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 1391.0
  • Bit_score: 2223
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=RPOB_MAGSA similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 1391.0
  • Bit_score: 2223
  • Evalue 0.0

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Taxonomy

Magnetospirillum magneticum → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4173
ATGACAGCAGCGACAAAGTCGTTCACCGGCCGCAAGCGTATCCGCAAGACCTTCGGGCGTATCCCGGAGATCACGCGGATGCCGAACCTGATCGAGGTGCAGAAACGCTCCTACGATCACTTCCTGCAGATCGGCGTGCCCGCCGAGAAGCGGGAGGATGTGGGCTTGCAGGAGGTGTTCAAGTCGGTATTCCCGATCAAGGACTTTTCCGAGCGCTCGGAGCTGCAATTCGTCCGCTATGAGCTCGAGGACCCCAAGTACGACGTCGAGGAGTGCCAGCAGCGCGGCATGACCTTCGCCGCGCCGCTCAAGGTGACCCTGCGCCTTGTCGTCTGGGACGTGGACGAGGAAACCGGTGCCCGCTCCATCCGCGATATCAAGGAGCAGGACGTCTATATGGGCGATATGCCGCTGATGACGACCAACGGCACCTTCATCGTCAATGGCACAGAGCGCGTCATCGTCAGCCAGATGCACCGGTCGCCCGGCGCATTCTTCGATCATGACAAGGGCAAGACCCATTCTTCCGGCAAGTATCTGTTCGCCGCGCGCGTCATTCCCTATCGCGGGTCGTGGCTGGATTTCGAGTTCGACGCCAAGGATCTAGTCTATGTGCGCATCGACCGGCGCCGCAAGCTGCCGGCGACGACGCTGCTGCTCGCCCTCTGGGGCACGAATGCCATCAAGAAGAGCACCGCCGGCAAGGAGATCACCGATGATGAGCGACGCTTTGGCGGCATGTCGTCGGAAGAGATCCTGAATTATTTCTATCAGCAGGTGGTCTTCACCAAAACCAAGAAGGGCTGGCAGACCCAGTTCGACCCCGAGCGTATGCGCGGTATGAAGCTGCTGCGCGACCTCGTCGATGCGAAGACCGGCAAGTCGGTCGCCGAAGCCGGCGCGAAAATGACACCGCGTCTGGCCAAGAAGCTCCAGGACCAGGGACTGAAGGAGCAACTGGTCACGGTCGAGGATCTGGTGGGCCGCTATTCGGCTGTCGACCTGATCAATGAGAAGACCGGCGAGATTTATGTCGAAGCGGGGACCGAGCTGACAGAGAAGCACGTTCAGACGCTGGAAGATGCGGGCATCGCCACGCTGCCGACACTGGCCATCGACAATATCAATGTCGGACCTTACATGCGCAATACTCTGACGGTGGACAAGAACAGCTGCCGCGAGGAAGCACTGATCGACATCTATCGCGTCATGCGCCCGGGCGAGCCGCCGACGCTGGAGACGGCGGAAACCCTGTTCCAGGGCCTGTTCTTCGACAGTGAGCGCTATGACCTGTCCGCGGTCGGCCGGGTGAAGATGAACTCGCGTCTGAATCTCAAAGCGCCCGACACCATGCGCGTGCTGCGCAAGGAAGATATCCTGGCGATCCTCAAGGTTCTCGTCGACCTCAAGGACGGCCGCGGCGAAATCGACGATATCGATCATTTGGGCAACCGCCGCGTCCGCTCGGTTGGCGAGCTTCTGGAAAATCAGTACCGCATCGGCCTGCTGCGCATGGAGCGGGCAATCCGCGAACGCATGAGCTCGGTGGAAATCGACTCCGTCATGCCGCACGACCTGATCAACGCCAAGCCGGCGGCGGCGGCGGTGCGCGAATTCTTCGGCTCGTCGCAGCTTTCCCAGTTCATGGATCAGACCAATCCGCTGTCGGAAGTGACGCATAAGCGGCGTCTCTCGGCCCTCGGGCCGGGCGGTCTGACCCGCGAACGCGCCGGATTCGAAGTGCGCGACGTGCATCCCACCCACTACGGCCGCATCTGTCCGATCGAGACGCCGGAAGGCCCGAATATCGGCCTCATCAACAGCCTCGCCACTTATGCGCGGGTGAATCAATACGGCTTCATCGAGACGCCCTACCGCAAGGTGGCGAAGGGTCAGGTCACCGCTGAAGTGGTGTATCTGTCGGCCATGGAGGAGGGGCGCTACACCATCGCCCAGGCCAATGCCGAGATCGACGCCAAGGGCAAGTTTACCTCCGATCTCATCAGCTGCCGGCGCGGCGGCGACTTCGTCATGTCCCGCCCCGACGACATCGAATTCATGGACGTGTCGCCGAAACAGCTCGTGTCGGTGGCCGCGGCGCTGATCCCATTCCTGGAGAACGACGACGCCAACCGCGCGCTCATGGGTTCGAACATGCAGCGCCAGGCCGTGCCGCTGATCCGCGCCGAAGCGCCCCTGGTAGGCACCGGCATGGAAGAGACGGTGGCGCGCGACTCCGGCGTGGTCATCACGGCAAAGCGCGGCGGCGTCGTCGACCAGATCGACGGCACGCGCATCGTTATCCGCATCATGGAAGAGGAGACGGCAAGCGATTCCTCGGGCGTCGATATCTACAACCTGCTGAAGTATCAGCGGTCGAACCAGAATACTTGCATCAACCAGCGGCCGTTAGTGAAGGTGGGAGATGTGGTGCGGTCCGGCGACACCATCGCCGACGGTCCGTCGACGCAGCTGGGCGAGCTGGCCCTCGGCCGCAACGTGCTCTGCGCGTTCATGCCGTGGAACGGCTATAACTTCGAAGACTCGATCCTGATCTCCGAGCGCATCGTCAGCGACGACGTGTTCACCTCGATCCATATCGAGGAATTCGAAGTGATGGCCCGCGACACCAAGCTGGGCCAGGAAGAAATCACCCGCGACATCCCGAACGTCGGCGAAGAAGCGCTGAAGAACCTGGACGAGGCGGGCATCGTCTATATCGGCGCCGAGGTTCAGCCGGGAGATATTCTGGTGGGCAAGGTGACGCCGAAGGGCGAGTCGCCGATGACGCCGGAAGAGAAACTGCTCCGCGCCATCTTTGGCGAAAAGGCGTCGGACGTGCGCGACACCAGCCTGCGGCTGCCGCCGGGCGTCAACGGAACGATCGTCGAGGTGCGGGTGTTCTCGCGCCGCGGCGTCGACAAGGACGAACGCGCGCTGGCCATCGAGCGGGCCGAGATCGAGCGTCTGGCGAAGGACCGCGATGACGAAAGGGCGATTCTGGAGCGCAGCTTCTATTCGCGCCTGAAGGAACTGCTGGTCAATCAGACGGCCGCCGGCGGACCGAAGACGGTCAAGGCCGACACGCGCATCACCGAAAAGCTGCTCACCGAACTGCCGCCGGTGCAGTGGAAGCAGCTCACGGTGAAGAACGACAAGCGGATGACGGAGGTCGAAGGGCTGAAAAAGCACTTCAACGAAGCCGTCAATACGCTGACTCGCCGCTTCGAAGACAAGGTCGAGAAGCTGCAGCGTGGCGACGAATTGCCGCCGGGCGTGATGAAGATGGTCAAGGTGTTCGTCGCGGTGAAGCGCAAGCTGCAGCCCGGCGACAAGATGGCCGGCCGCCACGGCAACAAGGGCGTCGTCTCAACCATCGTGCCGTCGCAGGACATGCCGTATCTCGAAGACGGCCGTCCGGTCGACATCGTGCTGAATCCGCTGGGCGTGCCCTCGCGCATGAACGTCGGACAGATTCTGGAGACCCATCTGGGTTGGGCCTGCGCCAATCTCGGCCGCCAGGTCGGCGAGATGCTCGAGAGGATGCGCCAGCACAAGTCGGTCGACCTGCGTAAGAAGCTGAAGGACATCTACGGCGAAAAGATCCACAAGGCCGAAATCGCCGACCTCAGCGACGATCAGGTGATCGAGCTCTGCGAAAATCTGCGGTCCGGAATTCCGATCGCGTCGCCGGTGTTCGATGGCGCCCGCGAGGATGACATTGTCGGAATGCTGGAGCAGGCCGGCCTGCACCGGTCGGGCCAGGTCCGCCTGACCGATGGCCGGACCGGCGAAGCATTCGACCGCTCGGTGACCGTTGGCTACATCTATATGCTGAAGTTGCATCACCTGGTGGACGACAAGATCCACGCACGCTCGATCGGCCCGTACAGCCTGGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGCGAAATGGAGGTGTGGGCACTCGAGGCCTACGGCTCCGCCTACACCCTGCAGGAAATGCTGACTGTGAAGTCGGACGACGTCTCCGGCCGCACGAAGACCTACGAGGCCATCGTGCGCGGCGACGACAACTTCCAGGCCGGCATCCCCGAATCCTTCAACGTGCTGGTCAAGGAATTGCGGTCGCTCGGCCTCAATGTCGAGCTGAACCAGCGGAACTACTAG
PROTEIN sequence
Length: 1391
MTAATKSFTGRKRIRKTFGRIPEITRMPNLIEVQKRSYDHFLQIGVPAEKREDVGLQEVFKSVFPIKDFSERSELQFVRYELEDPKYDVEECQQRGMTFAAPLKVTLRLVVWDVDEETGARSIRDIKEQDVYMGDMPLMTTNGTFIVNGTERVIVSQMHRSPGAFFDHDKGKTHSSGKYLFAARVIPYRGSWLDFEFDAKDLVYVRIDRRRKLPATTLLLALWGTNAIKKSTAGKEITDDERRFGGMSSEEILNYFYQQVVFTKTKKGWQTQFDPERMRGMKLLRDLVDAKTGKSVAEAGAKMTPRLAKKLQDQGLKEQLVTVEDLVGRYSAVDLINEKTGEIYVEAGTELTEKHVQTLEDAGIATLPTLAIDNINVGPYMRNTLTVDKNSCREEALIDIYRVMRPGEPPTLETAETLFQGLFFDSERYDLSAVGRVKMNSRLNLKAPDTMRVLRKEDILAILKVLVDLKDGRGEIDDIDHLGNRRVRSVGELLENQYRIGLLRMERAIRERMSSVEIDSVMPHDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATYARVNQYGFIETPYRKVAKGQVTAEVVYLSAMEEGRYTIAQANAEIDAKGKFTSDLISCRRGGDFVMSRPDDIEFMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLIRAEAPLVGTGMEETVARDSGVVITAKRGGVVDQIDGTRIVIRIMEEETASDSSGVDIYNLLKYQRSNQNTCINQRPLVKVGDVVRSGDTIADGPSTQLGELALGRNVLCAFMPWNGYNFEDSILISERIVSDDVFTSIHIEEFEVMARDTKLGQEEITRDIPNVGEEALKNLDEAGIVYIGAEVQPGDILVGKVTPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVNGTIVEVRVFSRRGVDKDERALAIERAEIERLAKDRDDERAILERSFYSRLKELLVNQTAAGGPKTVKADTRITEKLLTELPPVQWKQLTVKNDKRMTEVEGLKKHFNEAVNTLTRRFEDKVEKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVVSTIVPSQDMPYLEDGRPVDIVLNPLGVPSRMNVGQILETHLGWACANLGRQVGEMLERMRQHKSVDLRKKLKDIYGEKIHKAEIADLSDDQVIELCENLRSGIPIASPVFDGAREDDIVGMLEQAGLHRSGQVRLTDGRTGEAFDRSVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGSAYTLQEMLTVKSDDVSGRTKTYEAIVRGDDNFQAGIPESFNVLVKELRSLGLNVELNQRNY*