ggKbase home page

PLM3_60_coex_sep16_scaffold_1892_4

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(1305..1754)

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA-processing protein RimM bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 142.0
  • Bit_score: 195
  • Evalue 2.30e-47
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 148.0
  • Bit_score: 105
  • Evalue 6.90e-21
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 148.0
  • Bit_score: 214
  • Evalue 8.90e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGCCGCACACCGACCGGCCCGAGCGCTTCGAGGGGCTGGGCGAGTGCGTGCTGTGGGACGAGGCCAGCGATGCCCGCGCCGTCCGCCGTATCACGGCGACGCGCCGGCAGGGCGACGCCGTGCTGCTCACGCTGGCGGGCTGCGAGTCGGTCGAGGCGGCGCGGGCGATCGTCGGACGGCTGGTGGCCCTCCCGCGCGCGCAGGCGCTGCCACTGCCGCCGGGGCACGTGTACCCGTGGCAGCTCGTCGGCTGCCGCGTGGTGATGGACGACGGACGAGCGATCGGGGAGCTGAGGGGCATCGAGCCGTCGCCGGCCCACGACCTCTGGGTCGTGCGAGGCGCCGAGCGCGAGCACCTGATCCCGGCGGTGCCGGAGATCGTGCTGGAGGTCGACGTCGGCGCCCGCCGGGTGGTGATCCGGCCGCCGGAGGGACTGCTCGACTTGTAG
PROTEIN sequence
Length: 150
MPHTDRPERFEGLGECVLWDEASDARAVRRITATRRQGDAVLLTLAGCESVEAARAIVGRLVALPRAQALPLPPGHVYPWQLVGCRVVMDDGRAIGELRGIEPSPAHDLWVVRGAEREHLIPAVPEIVLEVDVGARRVVIRPPEGLLDL*