ggKbase home page

PLM3_60_coex_sep16_scaffold_1892_5

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(1820..2068)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S16 bin=GWC2_Methylomirabilis_70_16 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 78.0
  • Bit_score: 122
  • Evalue 1.10e-25
rpsP; 30S ribosomal protein S16 similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 74.0
  • Bit_score: 110
  • Evalue 2.00e-22
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 80.0
  • Bit_score: 129
  • Evalue 1.20e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 249
GTGGCGGTGACGATTCGACTGCGACGTGAGGGATCGAACAAGCGGCCGCGATACCGCGTGGTGGTGGCGGACTCCCGCTCCCCGCGCGACGGCCGGTTCATCGAAGTGATCGGCCACTACAACCCGGTGACGCAGCCGCCGACGGTGAAGATCGACCGGGAGAGGGCGAGCGCGTGGATCAGCAAGGGGGCGCAGCCCTCGAACACCGTGAAGAAGCTGATCGCGGTGGTCGCGAAGGCGAGCGCGTAG
PROTEIN sequence
Length: 83
VAVTIRLRREGSNKRPRYRVVVADSRSPRDGRFIEVIGHYNPVTQPPTVKIDRERASAWISKGAQPSNTVKKLIAVVAKASA*