ggKbase home page

PLM3_60_coex_sep16_scaffold_2422_4

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(2239..3558)

Top 3 Functional Annotations

Value Algorithm Source
rho; transcription termination factor Rho bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 417.0
  • Bit_score: 757
  • Evalue 4.60e-216
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 437.0
  • Bit_score: 641
  • Evalue 1.30e-181
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 438.0
  • Bit_score: 800
  • Evalue 8.60e-229

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1320
ATGACCCGCCGAGAACGAGGACAGCCCAACACCACCGAGAACACCCCCGCGACGCCTGCCAACGGCATGAACCTCTCCGAGCTGAAGGAGAAGCCGATCTCCGACCTCAACGGGATCGCGCGCGATCTGAACGTCCAGAACTACGGCGGACTGCGCAAGCAGGAGCTGATCTTCAAGATCCTCCAGGCGCAGGCCGAGAAGGACGGGCTGATTTACGCCGAGGGCGTGCTGGAAGTGCTCCCGGACGGCTTCGGGTTCCTGCGGGCTCCCGACTACAACTATCTGCCGGGCCCCGACGACATCTACGTTTCGCCCTCCCAGATACGCCGCTTCGACCTCCGCACCGGCGACACGATCTCCGGCCAGGTCCGGCCGCCCAAGGACACCGAGCGGTACTTCGCGCTCCTCAAGGTCGAGGCGATCAACTTCGAGACGCCCGATCAGGCCCGCGAGAAGATCTTCTTCGACAACCTCACGCCGCTCTATCCGATGGAGCGGCTGCGCCTGGAGCACGAGCAGGAGAACCTGACGACGCGGGTCATGGACCTGCTCTCTCCCATCGGCAAGGGGCAGCGCGGCATGATCGTGGCGGCGCCCCGCACCGGCAAGACCATGATGCTGCAGTCGATCGCGCACGCGATCGCCACCAACCACCCCGAGGTCTACCTGATCGTCCTCCTGATCGACGAGCGGCCGGAAGAGGTCACCGACATGCAGCGGTCGGTGAAGGGCGAGGTGGTGTCGTCGACCTTCGACGAGCCGCCCCAGCGCCACATCCAGGTCGCCGACATGGTGATCGAGAAGGCCAAGCGGCTGGTCGAGCACAAGCGCGACGTCGTCATCCTCCTCGACTCGCTCACGCGCTTCGCGCGCGCCCACAACGCCGTGATCCCGTCCTCGGGCAAGGTGCTGTCGGGTGGGCTCGACGCCAACGCCCTGCAGCGGCCGCGGCGGTTCTTCGCGACGGCGCGCAACGTCGAAGAGGGCGGCTCGCTGACGATCATGGCCACGGCCATCGTGGACACCGGCAGCCGCATGGACGACGTGATCTTCGAGGAGTTCAAGGGCACCGGCAACATGGAGGTCCACCTCGACCGGCGCCTCATGGACAAGCGCATCTTCCCGACCATCAACATCGAGCAGTCCGGCACCCGGAAAGAGGAGCTGCTGCTGGAGAAGGACGAGCTGCAGAAGGTCTGGCTGCTGCGCAAGGCCCTGTCCCAGCTCAACCCGGTCGAGGCCATGGAGCTGCTGCTCGACAAGCTCAAGCAGACGCGCAGCAACAAGGAGTTCCTGGCCGCCATGCATTCGATGGGCTAG
PROTEIN sequence
Length: 440
MTRRERGQPNTTENTPATPANGMNLSELKEKPISDLNGIARDLNVQNYGGLRKQELIFKILQAQAEKDGLIYAEGVLEVLPDGFGFLRAPDYNYLPGPDDIYVSPSQIRRFDLRTGDTISGQVRPPKDTERYFALLKVEAINFETPDQAREKIFFDNLTPLYPMERLRLEHEQENLTTRVMDLLSPIGKGQRGMIVAAPRTGKTMMLQSIAHAIATNHPEVYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPPQRHIQVADMVIEKAKRLVEHKRDVVILLDSLTRFARAHNAVIPSSGKVLSGGLDANALQRPRRFFATARNVEEGGSLTIMATAIVDTGSRMDDVIFEEFKGTGNMEVHLDRRLMDKRIFPTINIEQSGTRKEELLLEKDELQKVWLLRKALSQLNPVEAMELLLDKLKQTRSNKEFLAAMHSMG*