ggKbase home page

PLM3_60_coex_sep16_scaffold_2422_5

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: comp(3691..4188)

Top 3 Functional Annotations

Value Algorithm Source
PpiC-type peptidyl-prolyl cis-trans isomerase bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 169.0
  • Bit_score: 224
  • Evalue 4.00e-56
PpiC-type peptidyl-prolyl cis-trans isomerase similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 170.0
  • Bit_score: 115
  • Evalue 1.30e-23
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 169.0
  • Bit_score: 234
  • Evalue 7.10e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 498
GTGTCGGTGACCGAGGCCGAGATCAACGAGTATCTCGACGAGAACCGTGCCAAGCTCGAGACCGGCCTGGCGTTTCATGCCCGCCACATCCTGATCACCCCCGAGGCCGACAGCGACGCCGGCTGGGAGGCGGCCCGGATCAAGGCCGACATGCTGCGCGCCCAGCTGCGGGACGGCGCCGACTTCACCGAGCTGGCCAAGCAGCATTCCCGGGACGCCACGGCCAAGGACGGGGGCGACCTCGGGACCCTCAAGCGGGGCGAGCTGGCTCCCGACATCGAGGCCGAGCTGCTGGGCCTGGGGGCGGGGCAGACCTCCCGCCCCGTGCGCTCGCCGCTCGGCTACCACGTCTTCCGACTGGATTCGAAGGACACCCTGGAGGGGGCCAGCATCCGCCAGCAGATCCGCGACATCTTATTCCGTCAGCAGTACGACACACGGCTCGAGGTCTGGCTGAAGGAAATCAAGCAGCGCGCCATCATCGAGGTCCGGCTATGA
PROTEIN sequence
Length: 166
VSVTEAEINEYLDENRAKLETGLAFHARHILITPEADSDAGWEAARIKADMLRAQLRDGADFTELAKQHSRDATAKDGGDLGTLKRGELAPDIEAELLGLGAGQTSRPVRSPLGYHVFRLDSKDTLEGASIRQQIRDILFRQQYDTRLEVWLKEIKQRAIIEVRL*