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PLM4_32_b1_sep16_scaffold_49

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_49_1
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3..584
DNA (582bp) protein (194aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:KFC59056.1}; EC=3.5.1.28 {ECO:0000313|EMBL:KFC59056.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
N-acetylmuramoyl-L-alanine amidase Tax=Flavobacterium sp. CF136 RepID=J2JXJ5_9FLAO
cell wall hydrolase/autolysin
PLM4_32_b1_sep16_scaffold_49_2
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

638..1588
DNA (951bp) protein (317aa)
Putative uncharacterized protein Tax=Flavobacterium frigoris PS1 RepID=H7FUN1_9FLAO
Organic solvent ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFC59055.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_49_3
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1602..2936
DNA (1335bp) protein (445aa)
Uncharacterized protein Tax=Flavobacterium sp. CF136 RepID=J3C7C4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC59054.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Fe-S oxidoreductase-like protein
PLM4_32_b1_sep16_scaffold_49_4
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3024..3815
DNA (792bp) protein (264aa)
Fe-S oxidoreductase Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002E76869
CoB--CoM heterodisulfide reductase {ECO:0000313|EMBL:KIA85850.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
CoB--CoM heterodisulfide reductase
PLM4_32_b1_sep16_scaffold_49_5
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3873..4355
DNA (483bp) protein (161aa)
ABC transporter ATPase Tax=Flavobacterium sp. WG21 RepID=UPI00034B71FC
ABC transporter ATPase {ECO:0000313|EMBL:KFC59051.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_49_6
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4375..4989
DNA (615bp) protein (205aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC59050.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Phosphoesterase PA-phosphatase related protein bin=GWA2_Flavobacterium_35_26 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
phosphoesterase PA-phosphatase related protein
PLM4_32_b1_sep16_scaffold_49_7
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5093..6292
DNA (1200bp) protein (400aa)
ABC transporter permease {ECO:0000313|EMBL:KIA85925.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Putative uncharacterized protein bin=GWF2_Bacteroidetes_29_10 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein
PLM4_32_b1_sep16_scaffold_49_8
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6276..8306
DNA (2031bp) protein (677aa)
Lead, cadmium, zinc and mercury transporting ATPase {ECO:0000313|EMBL:EIA07364.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EIA07364.1};; EC=3.6.3.4 {ECO:0000313|EMBL:EIA07364.1};; EC=3.6.3.5 {ECO:0000313|EMBL:EIA07364.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
Lead, cadmium, zinc and mercury transporting ATPase Tax=Flavobacterium frigoris PS1 RepID=H7FVV3_9FLAO
metal ABC transporter ATPase
PLM4_32_b1_sep16_scaffold_49_9
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8377..9510
DNA (1134bp) protein (378aa)
Group 1 glycosyl transferase Tax=Flavobacterium sp. F52 RepID=J1ABN0_9FLAO
N-acetyl-alpha-D-glucosaminyl L-malate synthase {ECO:0000313|EMBL:KFC59042.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
group 1 glycosyl transferase
PLM4_32_b1_sep16_scaffold_49_10
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9559..10059)
DNA (501bp) protein (167aa)
hypothetical protein Tax=Flavobacterium sp. WG21 RepID=UPI0003477AE3
Uncharacterized protein {ECO:0000313|EMBL:KIA98555.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_49_11
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10334..11398
DNA (1065bp) protein (355aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase Tax=Flavobacterium frigoris PS1 RepID=H7FUP0_9FLAO
PLM4_32_b1_sep16_scaffold_49_12
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11468..12742
DNA (1275bp) protein (425aa)
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KFC59037.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
C4-dicarboxylate transport protein bin=GWA2_Flavobacterium_35_26 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
sodium:dicarboxylate symporter
PLM4_32_b1_sep16_scaffold_49_13
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12996..15212
DNA (2217bp) protein (739aa)
Histidine kinase {ECO:0000313|EMBL:KFC59036.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KFC59036.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Signal transduction histidine kinase Tax=Flavobacterium sp. CF136 RepID=J2JCG3_9FLAO
integral membrane sensor hybrid histidine kinase
PLM4_32_b1_sep16_scaffold_49_14
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15346..15816)
DNA (471bp) protein (157aa)
Putative heat-shock related protein Tax=Flavobacterium frigoris PS1 RepID=H7FU68_9FLAO
Heat-shock protein {ECO:0000313|EMBL:KIA85862.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
heat shock protein Hsp20
PLM4_32_b1_sep16_scaffold_49_15
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15971..17221)
DNA (1251bp) protein (417aa)
ATP-dependent RNA helicase RhlE Tax=Flavobacterium frigoris PS1 RepID=H7FU69_9FLAO
RNA helicase {ECO:0000313|EMBL:KIA85863.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
DEAD/DEAH box helicase
PLM4_32_b1_sep16_scaffold_49_16
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17348..18388)
DNA (1041bp) protein (347aa)
arginase Tax=Flavobacterium sp. ACAM 123 RepID=UPI0003158ACE
Arginase {ECO:0000313|EMBL:KFC60984.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
arginase/agmatinase/formiminoglutamase
PLM4_32_b1_sep16_scaffold_49_17
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18474..19349
DNA (876bp) protein (292aa)
Uncharacterized protein Tax=Flavobacterium sp. CF136 RepID=J2SJS3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC60983.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_49_18
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19404..20642)
DNA (1239bp) protein (413aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase Tax=Flavobacterium frigoris PS1 RepID=H7FU72_9FLAO
PLM4_32_b1_sep16_scaffold_49_19
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(20651..21727)
DNA (1077bp) protein (359aa)
Glutamine cyclotransferase bin=GWA2_Flavobacterium_35_26 species=Flavobacterium columnare genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
Glutamine cyclotransferase {ECO:0000313|EMBL:ESU18914.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
glutamine cyclotransferase
PLM4_32_b1_sep16_scaffold_49_20
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22020..22823
DNA (804bp) protein (268aa)
Oxidoreductase, short chain dehydrogenase/reductase family Tax=Flavobacterium frigoris PS1 RepID=H7FU74_9FLAO
Short-chain dehydrogenase {ECO:0000313|EMBL:KIA85867.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
short-chain dehydrogenase/reductase SDR
PLM4_32_b1_sep16_scaffold_49_21
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22973..23629
DNA (657bp) protein (219aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494, ECO:0000256|SAAS:SAAS00118670};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
translaldolase (EC:2.2.1.2)
transaldolase Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002F0B797
PLM4_32_b1_sep16_scaffold_49_22
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23920..25356)
DNA (1437bp) protein (479aa)
hypothetical protein Tax=Flavobacterium rivuli RepID=UPI00037CA850
putative transmembrane transporter
Tax=CG_Maritim_01
PLM4_32_b1_sep16_scaffold_49_23
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25638..26339)
DNA (702bp) protein (234aa)
Two component transcriptional regulator, LytTR family Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FB58_FLAJ1
Chemotaxis protein CheY {ECO:0000313|EMBL:KFC60976.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
LytTR family two component transcriptional regulator
PLM4_32_b1_sep16_scaffold_49_24
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26329..27459)
DNA (1131bp) protein (377aa)
Putative regulator of cell autolysis Tax=Flavobacterium sp. CF136 RepID=J2JCF2_9FLAO
Histidine kinase {ECO:0000313|EMBL:KFC60974.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
signal transduction histidine kinase LytS
PLM4_32_b1_sep16_scaffold_49_25
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27691..30711
DNA (3021bp) protein (1007aa)
TonB-linked outer membrane protein, SusC/RagA family Tax=Flavobacterium sp. CF136 RepID=J3C7D5_9FLAO
TonB-dependent receptor {ECO:0000313|EMBL:KIA85872.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
TonB-dependent receptor, plug
PLM4_32_b1_sep16_scaffold_49_26
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30724..32313
DNA (1590bp) protein (530aa)
Uncharacterized protein Tax=Flavobacterium sp. CF136 RepID=J2JXH4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA85873.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_49_27
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32769..34706
DNA (1938bp) protein (646aa)
Glucosamine-6-phosphate deaminase {ECO:0000313|EMBL:KFC60970.1}; EC=3.5.99.6 {ECO:0000313|EMBL:KFC60970.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate isomerase Tax=Flavobacterium sp. CF136 RepID=J2SJR7_9FLAO
PLM4_32_b1_sep16_scaffold_49_28
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34831..36903
DNA (2073bp) protein (691aa)
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:KFC60969.1}; EC=3.2.1.52 {ECO:0000313|EMBL:KFC60969.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
beta-N-acetylhexosaminidase (EC:3.2.1.52)
N-acetyl-beta-hexosaminidase Tax=Flavobacterium sp. CF136 RepID=J3C7B0_9FLAO
PLM4_32_b1_sep16_scaffold_49_29
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

37207..38826
DNA (1620bp) protein (540aa)
ABC transporter, ATP-binding protein Tax=Flavobacterium frigoris PS1 RepID=H7FSH7_9FLAO
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIA85876.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
ABC transporter-like protein
PLM4_32_b1_sep16_scaffold_49_30
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

39115..39654
DNA (540bp) protein (180aa)
Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase {ECO:0000313|EMBL:KFC59493.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein PyrR bin=GWA2_Flavobacterium_35_26 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
phosphoribosyltransferase
Displaying items 1-30 of 40 in total

View Taxonomy