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PLM4_32_b1_sep16_scaffold_8644

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_8644_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(2..1273)
DNA (1272bp) protein (424aa)
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains bin=CNBR_ACIDO species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sasR; Sigma-54 dependent DNA-binding response regulator SasR
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_b1_sep16_scaffold_8644_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(1336..2493)
DNA (1158bp) protein (386aa)
signal transduction histidine kinase, nitrogen specific, NtrB bin=CNBR_ACIDO species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
gnfL; nitrogen fixation master sensor histidine kinase, PAS domain-containing
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_b1_sep16_scaffold_8644_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(2592..4499)
DNA (1908bp) protein (636aa)
ABC transporter ATPase; K06158 ATP-binding cassette, subfamily F, member 3 bin=CNBR_ACIDO species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_b1_sep16_scaffold_8644_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(4511..5281)
DNA (771bp) protein (257aa)
response regulator receiver protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
chemotaxis protein CheY
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_b1_sep16_scaffold_8644_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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5390..5974
DNA (585bp) protein (195aa)
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sigma-70 family RNA polymerase sigma factor
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_b1_sep16_scaffold_8644_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

5980..6426
DNA (447bp) protein (149aa)
hypothetical protein bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Displaying 6 items

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