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PLM4_5_b1_sep16_scaffold_4027

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_4027_1
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..165)
DNA (165bp) protein (55aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PYU4_9FIRM
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
PLM4_5_b1_sep16_scaffold_4027_2
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(162..887)
DNA (726bp) protein (242aa)
3-oxoacyl-ACP reductase; K10780 enoyl-[acyl carrier protein] reductase III [EC:1.3.1.-] bin=bin3_NC10 species=Fluoribacter dumoffii genus=Fluoribacter taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
fabL; enoyl-(acyl carrier protein) reductase (EC:1.3.1.10)
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
PLM4_5_b1_sep16_scaffold_4027_3

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comp(1007..1285)
DNA (279bp) protein (93aa)
isoprenylcysteine carboxyl methyltransferase bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:EKE20327.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_4027_4
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1275..2510)
DNA (1236bp) protein (412aa)
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
PLM4_5_b1_sep16_scaffold_4027_5
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2507..3604)
DNA (1098bp) protein (366aa)
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
PLM4_5_b1_sep16_scaffold_4027_6
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3601..4857)
DNA (1257bp) protein (419aa)
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_5_b1_sep16_scaffold_4027_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4988..5215
DNA (228bp) protein (76aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XB23_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEF62708.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_4027_8
unknown

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comp(5586..5780)
DNA (195bp) protein (65aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4027_9
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5781..6947
DNA (1167bp) protein (389aa)
Major facilitator superfamily MFS_1 bin=GWC2_Bacteroidetes_40_13 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
sugar transport-like membrane protein
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM4_5_b1_sep16_scaffold_4027_10
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

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6998..8104
DNA (1107bp) protein (369aa)
ROK family protein bin=GWC2_Ignavibacteria_56_12 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
glucokinase
Tax=GWF2_Elusimicrobia_62_30_curated
PLM4_5_b1_sep16_scaffold_4027_11
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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8241..10679
DNA (2439bp) protein (813aa)
beta-mannosidase (EC:3.2.1.25)
Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JIV6_9BACT
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
PLM4_5_b1_sep16_scaffold_4027_12
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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10737..12152
DNA (1416bp) protein (472aa)
Uncharacterized protein Tax=Fibrella aestuarina BUZ 2 RepID=I0K7R5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH00168.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
PLM4_5_b1_sep16_scaffold_4027_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

12201..14393
DNA (2193bp) protein (731aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XK83_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59721.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_4027_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

14419..15579
DNA (1161bp) protein (387aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XH06_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60927.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
3'-5' exonuclease, PolB
PLM4_5_b1_sep16_scaffold_4027_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


15629..16054
DNA (426bp) protein (142aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Proline--tRNA ligase Tax=Pedosphaera parvula Ellin514 RepID=B9XN55_9BACT
prolyl-tRNA synthetase
Displaying 15 items

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