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PLM4_5_b1_sep16_scaffold_4078

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_4078_1
CG_Arma_01, Armatimonadetes, Bacteria

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comp(2..2068)
DNA (2067bp) protein (689aa)
CRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1S7_DESTA
CRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD
Tax=CG_Arma_01
PLM4_5_b1_sep16_scaffold_4078_2
unknown

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comp(2053..2229)
DNA (177bp) protein (59aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4078_3
unknown

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comp(2700..2897)
DNA (198bp) protein (66aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4078_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3070..5250
DNA (2181bp) protein (727aa)
Alpha-glucan phosphorylase {ECO:0000313|EMBL:EEF57047.1}; EC=2.4.1.1 {ECO:0000313|EMBL:EEF57047.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Alpha-glucan phosphorylase Tax=Pedosphaera parvula Ellin514 RepID=B9XSY6_9BACT
alpha-glucan phosphorylase
PLM4_5_b1_sep16_scaffold_4078_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5341..6426
DNA (1086bp) protein (362aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Probable dual-specificity RNA methyltransferase RlmN Tax=Pedosphaera parvula Ellin514 RepID=B9XSY7_9BACT
radical SAM protein
PLM4_5_b1_sep16_scaffold_4078_6
unknown

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6647..7084
DNA (438bp) protein (146aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4078_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(7088..8431)
DNA (1344bp) protein (448aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDH9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62125.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_4078_8
Cyanothece sp. ATCC 51142, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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8678..9514
DNA (837bp) protein (279aa)
Uncharacterized protein Tax=Cyanothece RepID=B1X239_CYAA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB54200.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain ATCC 51142).;"
PLM4_5_b1_sep16_scaffold_4078_9
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(9606..11162)
DNA (1557bp) protein (519aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025R5_SOLUE
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
Displaying 9 items

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