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PLM4_5_b1_sep16_scaffold_4160

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_4160_1
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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3..275
DNA (273bp) protein (91aa)
ABC transporter permease Tax=Pseudomonas pyrrocinia RepID=UPI00030A3090
branched-chain amino acid transport system / permease component family protein
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_5_b1_sep16_scaffold_4160_2
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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272..1192
DNA (921bp) protein (307aa)
ribokinase; K00852 ribokinase [EC:2.7.1.15] bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Bacteroides intestinalis CAG:315 genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
ribokinase
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
PLM4_5_b1_sep16_scaffold_4160_3
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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1722..2474
DNA (753bp) protein (251aa)
Metallophosphoesterase Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FTI0_9DELT
metallophosphoesterase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_5_b1_sep16_scaffold_4160_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2467..2823)
DNA (357bp) protein (119aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XQE8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57972.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
prepilin-type N-terminal cleavage/methylation domain
PLM4_5_b1_sep16_scaffold_4160_5

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3116..6298
DNA (3183bp) protein (1061aa)
Hypothetical conserved protein Tax=uncultured prokaryote RepID=H5SDR2_9ZZZZ
Hypothetical conserved protein {ECO:0000313|EMBL:BAL54298.1}; species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
protein of unknown function DUF187
PLM4_5_b1_sep16_scaffold_4160_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6372..6998
DNA (627bp) protein (209aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XI62_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60555.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_4160_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7019..7747
DNA (729bp) protein (243aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 Tax=Pedosphaera parvula Ellin514 RepID=B9XI61_9BACT
PLM4_5_b1_sep16_scaffold_4160_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7731..8252
DNA (522bp) protein (174aa)
Photosystem I assembly BtpA Tax=Pedosphaera parvula Ellin514 RepID=B9XI59_9BACT
Photosystem I assembly BtpA {ECO:0000313|EMBL:EEF60552.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
photosystem I assembly BtpA
PLM4_5_b1_sep16_scaffold_4160_9
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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8470..9252
DNA (783bp) protein (261aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI00037F8496
Uncharacterized protein {ECO:0000313|EMBL:CDH45911.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_4160_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(9260..10087)
DNA (828bp) protein (276aa)
Short-chain dehydrogenase/reductase SDR Tax=Pedosphaera parvula Ellin514 RepID=B9XLE3_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EEF59346.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NAD dependent epimerase/dehydratase family protein
Displaying 10 items

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