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PLM4_5_b1_sep16_scaffold_4401

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_4401_1
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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3..986
DNA (984bp) protein (328aa)
Transmembrane protein Tax=Pedosphaera parvula Ellin514 RepID=B9XN70_9BACT
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_5_b1_sep16_scaffold_4401_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(994..1419)
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XN73_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58735.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_4401_3
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

1542..2504
DNA (963bp) protein (321aa)
Tax=CG_Elusi_03
PLM4_5_b1_sep16_scaffold_4401_4
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

comp(2676..4481)
DNA (1806bp) protein (602aa)
Nitrite reductase Tax=Sorangium cellulosum So0157-2 RepID=S4XQD5_SORCE
nitrite reductase
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
PLM4_5_b1_sep16_scaffold_4401_5
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4499..4948)
DNA (450bp) protein (150aa)
Putative cytochrome c nitrite reductase, small subunit NrfH Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DA91_MYXXD
cytochrome c nitrite reductase small subunit NrfH
Putative cytochrome c nitrite reductase, small subunit NrfH {ECO:0000313|EMBL:ABF87584.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
PLM4_5_b1_sep16_scaffold_4401_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(5209..5811)
DNA (603bp) protein (201aa)
50S ribosomal protein L9 Tax=Pedosphaera parvula Ellin514 RepID=B9XFD2_9BACT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
50S ribosomal protein L9
PLM4_5_b1_sep16_scaffold_4401_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5904..6380)
DNA (477bp) protein (159aa)
Single-stranded DNA-binding protein Tax=Pedosphaera parvula Ellin514 RepID=B9XFD3_9BACT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
single-stranded DNA-binding protein
PLM4_5_b1_sep16_scaffold_4401_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(6402..6722)
DNA (321bp) protein (107aa)
Ribosomal protein S6 Tax=Pedosphaera parvula Ellin514 RepID=B9XFD4_9BACT
Ribosomal protein S6 {ECO:0000313|EMBL:EEF61298.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rpsF; ribosomal protein S6
PLM4_5_b1_sep16_scaffold_4401_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(6719..7312)
DNA (594bp) protein (198aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase Tax=Pedosphaera parvula Ellin514 RepID=B9XFD5_9BACT
PLM4_5_b1_sep16_scaffold_4401_10
unknown

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7332..7952
DNA (621bp) protein (207aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4401_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8155..9099)
DNA (945bp) protein (315aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase Tax=Pedosphaera parvula Ellin514 RepID=B9XFD7_9BACT
PLM4_5_b1_sep16_scaffold_4401_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9206..9412)
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XIJ8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60261.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_4401_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9409..9981)
DNA (573bp) protein (191aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XIJ7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60260.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_4401_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9984..10256)
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XIJ6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60259.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_4401_15
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

10408..13629
DNA (3222bp) protein (1074aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI000373F83E
spore coat protein CotH
Spore coat protein CotH {ECO:0000313|EMBL:ADE54755.1}; species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;"
Displaying 15 items

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