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PLM4_5_b1_sep16_scaffold_4470

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_4470_1
unknown

Not on your lists

comp(1..348)
DNA (348bp) protein (116aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4470_2
unknown

Not on your lists

comp(461..976)
DNA (516bp) protein (172aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4470_3
unknown

Not on your lists

comp(1173..1601)
DNA (429bp) protein (143aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4470_4
unknown

Not on your lists

comp(1561..1851)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4470_5
unknown

Not on your lists

comp(1955..2512)
DNA (558bp) protein (186aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4470_6
unknown

Not on your lists

3165..3428
DNA (264bp) protein (88aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4470_7
unknown

Not on your lists

comp(3425..3757)
DNA (333bp) protein (111aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4470_8
unknown

Not on your lists

3798..4157
DNA (360bp) protein (120aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4470_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(4319..5020)
DNA (702bp) protein (234aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XMZ9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58795.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
prepilin-type N-terminal cleavage/methylation domain
PLM4_5_b1_sep16_scaffold_4470_10
unknown

Not on your lists

comp(5017..5433)
DNA (417bp) protein (139aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4470_11
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6010..7149)
DNA (1140bp) protein (380aa)
Type II/IV secretion system ATPase TadZ/CpaE {ECO:0000313|EMBL:GAM98442.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
PLM4_5_b1_sep16_scaffold_4470_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(7476..8417)
DNA (942bp) protein (314aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8L5_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA24966.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM4_5_b1_sep16_scaffold_4470_13
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

8965..9855
DNA (891bp) protein (297aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01977}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01977};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01977}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01977}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01977}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
diphosphate--fructose-6-phosphate 1-phosphotransferase (EC:2.7.1.90)
6-phosphofructokinase Tax=Opitutaceae bacterium TAV1 RepID=I6AQC9_9BACT
PLM4_5_b1_sep16_scaffold_4470_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9865..11013)
DNA (1149bp) protein (383aa)
Uncharacterized protein Tax=Singulisphaera acidiphila RepID=L0DRS6_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA31091.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM4_5_b1_sep16_scaffold_4470_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11298..12044)
DNA (747bp) protein (249aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XHD5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60770.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
protein tyrosine phosphatase
PLM4_5_b1_sep16_scaffold_4470_16
unknown

Not on your lists

comp(12118..12645)
DNA (528bp) protein (176aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4470_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(12671..13318)
DNA (648bp) protein (216aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XS45_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF57341.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ECF subfamily RNA polymerase sigma-24 factor
PLM4_5_b1_sep16_scaffold_4470_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13315..14379)
DNA (1065bp) protein (355aa)
Polyprenyl synthetase Tax=Pedosphaera parvula Ellin514 RepID=B9XS46_9BACT
Polyprenyl synthetase {ECO:0000313|EMBL:EEF57342.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ispA; Geranylgeranyl pyrophosphate synthase
PLM4_5_b1_sep16_scaffold_4470_19
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14442..14954)
DNA (513bp) protein (171aa)
Binding-protein-dependent transport systems inner membrane component Tax=Pedosphaera parvula Ellin514 RepID=B9XH61_9BACT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EEF60696.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
binding-protein-dependent transport system inner membrane protein
PLM4_5_b1_sep16_scaffold_4470_20
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14979..15224)
DNA (246bp) protein (82aa)
Binding-protein-dependent transport systems inner membrane component Tax=Pedosphaera parvula Ellin514 RepID=B9XH61_9BACT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EEF60696.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
binding-protein-dependent transport systems inner membrane component
Displaying 20 items

View Taxonomy