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PLM4_5_b1_sep16_scaffold_1774

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_1774_1
unknown

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232..330
DNA (99bp) protein (33aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_1774_2
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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323..1345
DNA (1023bp) protein (341aa)
Uncharacterized protein Tax=Sodalis glossinidius (strain morsitans) RepID=Q2NQV1_SODGM
walW; Lipopolysaccharide biosynthesis protein
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AHF78964.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis praecaptivus.;"
PLM4_5_b1_sep16_scaffold_1774_3
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

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1346..2107
DNA (762bp) protein (254aa)
hypothetical protein Tax=Spirochaeta bajacaliforniensis RepID=UPI0003665FAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY46255.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
PLM4_5_b1_sep16_scaffold_1774_4
unknown

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2159..2665
DNA (507bp) protein (169aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_1774_5
marine gamma proteobacterium HTCC2080, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2688..4643)
DNA (1956bp) protein (652aa)
Uncharacterized protein Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z3T9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAW41479.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2080.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_1774_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4640..5842)
DNA (1203bp) protein (401aa)
acyltransferase Tax=Rhizobium loti RepID=UPI000366F661
acyltransferase
Acyltransferase 3 {ECO:0000313|EMBL:CDX17212.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
PLM4_5_b1_sep16_scaffold_1774_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(5844..6404)
DNA (561bp) protein (187aa)
Putative Flavin reductase-like protein, contains FMN-binding domain Tax=Candidatus Nitrospira defluvii RepID=D8PGK5_9BACT
putative flavin reductase-like protein, contains FMN-binding domain
Putative Flavin reductase-like protein, contains FMN-binding domain {ECO:0000313|EMBL:CBK42392.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM4_5_b1_sep16_scaffold_1774_8
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6343..6909)
DNA (567bp) protein (189aa)
Putative uncharacterized protein Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1K7Y3_BURCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA93424.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia (strain MC0-3).;"
PLM4_5_b1_sep16_scaffold_1774_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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7097..8197
DNA (1101bp) protein (367aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CCU63905.1}; EC=5.1.3.14 {ECO:0000313|EMBL:CCU63905.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
wbpI; UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI0003605B8C
PLM4_5_b1_sep16_scaffold_1774_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8215..8946
DNA (732bp) protein (244aa)
N-acetylmannosaminyltransferase {ECO:0000313|EMBL:CCU63904.1}; EC=2.4.1.187 {ECO:0000313|EMBL:CCU63904.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein Tax=Massilia niastensis RepID=UPI00037713D1
WecB/TagA/CpsF family glycosyltransferase
PLM4_5_b1_sep16_scaffold_1774_11
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

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comp(8908..9861)
DNA (954bp) protein (318aa)
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase bin=GWF2_Lentisphaerae_52_8 species=Helicobacter canadensis genus=Helicobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Tax=GWF2_Lentisphaerae_44_16_curated
PLM4_5_b1_sep16_scaffold_1774_12
Anoxybacillus sp. DT3-1, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9979..11163)
DNA (1185bp) protein (395aa)
Glycosyl transferase group 1 Tax=Anoxybacillus sp. DT3-1 RepID=M5QT77_9BACI
Glycosyl transferase group 1 {ECO:0000313|EMBL:EMI10455.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus sp. DT3-1.;"
group 1 glycosyl transferase
PLM4_5_b1_sep16_scaffold_1774_13
unknown

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comp(11160..11315)
DNA (156bp) protein (52aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_1774_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(11309..11947)
DNA (639bp) protein (213aa)
Asparagine synthetase Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QWZ5_PIRSD
asparagine synthase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 14 items

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