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PLM4_5_b1_sep16_scaffold_3072

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_3072_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2..295
DNA (294bp) protein (98aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Protoheme IX farnesyltransferase Tax=Pedosphaera parvula Ellin514 RepID=B9XST7_9BACT
protoheme IX farnesyltransferase
PLM4_5_b1_sep16_scaffold_3072_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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312..2120
DNA (1809bp) protein (603aa)
Cytochrome-c oxidase {ECO:0000313|EMBL:EEF57105.1}; EC=1.9.3.1 {ECO:0000313|EMBL:EEF57105.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
cytochrome C oxidase subunit I Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000379E0F6
cyoB; Heme/copper-type cytochrome oxidase, subunit 1
PLM4_5_b1_sep16_scaffold_3072_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2192..2965
DNA (774bp) protein (258aa)
Cytochrome c oxidase subunit III Tax=Pedosphaera parvula Ellin514 RepID=B9XST9_9BACT
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:EEF57106.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
cyoC; Heme/copper-type cytochrome oxidase, subunit 3
PLM4_5_b1_sep16_scaffold_3072_4
R_WOR_2_48_11, WOR-2, Bacteria

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2969..3283
DNA (315bp) protein (105aa)
hypothetical protein VspiD_10905 bin=GWA2_Ignavibacteria_55_11 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
PLM4_5_b1_sep16_scaffold_3072_5
unknown

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3289..3498
DNA (210bp) protein (70aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_3072_6
unknown

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3506..3790
DNA (285bp) protein (95aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_3072_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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3819..4544
DNA (726bp) protein (242aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037EBE2F
cyoA; Heme/copper-type cytochrome oxidase, subunit 2
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_5_b1_sep16_scaffold_3072_8

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4663..5262
DNA (600bp) protein (200aa)
lysine decarboxylase Tax=Schlesneria paludicola RepID=UPI00029A4E52
Uncharacterized protein {ECO:0000313|EMBL:EQD30319.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_3072_9
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(5325..7532)
DNA (2208bp) protein (736aa)
Uncharacterized protein Tax=Bacteroides uniformis CAG:3 RepID=R7EMI4_9BACE
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
Displaying 9 items

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