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PLM4_5_b1_sep16_scaffold_3245

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_3245_1
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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1..531
DNA (531bp) protein (177aa)
Transcriptional regulator Tax=Opitutaceae bacterium TAV1 RepID=I6B476_9BACT
Transcriptional regulator {ECO:0000313|EMBL:EIQ02068.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
GntR family transcriptional regulator
PLM4_5_b1_sep16_scaffold_3245_2
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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613..2187
DNA (1575bp) protein (525aa)
Glycoside hydrolase family 43 Tax=Fibrisoma limi BUZ 3 RepID=I2GCY5_9BACT
Glycoside hydrolase family 43 {ECO:0000313|EMBL:CCH51759.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
glycoside hydrolase
PLM4_5_b1_sep16_scaffold_3245_3
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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2209..4863
DNA (2655bp) protein (885aa)
Glycoside hydrolase family 2 sugar binding Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZU93_OPITP
Glycoside hydrolase family 2 sugar binding {ECO:0000313|EMBL:ACB76655.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
glycoside hydrolase
PLM4_5_b1_sep16_scaffold_3245_4
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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4893..5162
DNA (270bp) protein (90aa)
Putative uncharacterized protein Tax=Methylobacter tundripaludum SV96 RepID=G3IX14_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGW23369.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_3245_5
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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comp(5318..6592)
DNA (1275bp) protein (425aa)
Beta-lactamase Tax=Chthoniobacter flavus Ellin428 RepID=B4CY68_9BACT
beta-lactamase
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
PLM4_5_b1_sep16_scaffold_3245_6
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6668..7930)
DNA (1263bp) protein (421aa)
endo-1,4-beta-xylanase Tax=Spirosoma luteum RepID=UPI000368975D
Uncharacterized protein {ECO:0000313|EMBL:CCH53593.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
glycoside hydrolase
PLM4_5_b1_sep16_scaffold_3245_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(7978..8283)
DNA (306bp) protein (102aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003610F03
hypothetical protein
PLM4_5_b1_sep16_scaffold_3245_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8396..8935)
DNA (540bp) protein (180aa)
Putative uncharacterized protein Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TJC2_BURSG
Protein of unknown function DUF3455
Uncharacterized protein {ECO:0000313|EMBL:AHG92684.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_5_b1_sep16_scaffold_3245_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(8967..9572)
DNA (606bp) protein (202aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XC57_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF62525.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ECF subfamily RNA polymerase sigma-24 factor
PLM4_5_b1_sep16_scaffold_3245_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(9852..11378)
DNA (1527bp) protein (509aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDS8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62224.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
serine/threonine protein kinase
Displaying 10 items

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