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PLM4_5_b1_sep16_scaffold_3262

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_3262_1
unknown

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365..1036
DNA (672bp) protein (224aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_3262_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1016..1300)
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9X9P8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63219.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_3262_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1389..3575)
DNA (2187bp) protein (729aa)
Elongation factor G Tax=Pedosphaera parvula Ellin514 RepID=B9XFN3_9BACT
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
fusA; translation elongation factor G, GTPase
PLM4_5_b1_sep16_scaffold_3262_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3658..3783)
DNA (126bp) protein (42aa)
30S ribosomal protein S7 Tax=Pedosphaera parvula Ellin514 RepID=B9XFN4_9BACT
Suspect SCG annotation. See neighboring gene [PLM4_5_b1_sep16_scaffold_3262_5].
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
30S ribosomal protein S7
PLM4_5_b1_sep16_scaffold_3262_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(3780..4130)
DNA (351bp) protein (117aa)
30S ribosomal protein S7 Tax=Pedosphaera parvula Ellin514 RepID=B9XFN4_9BACT
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
30S ribosomal protein S7
PLM4_5_b1_sep16_scaffold_3262_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(4172..4573)
DNA (402bp) protein (134aa)
30S ribosomal protein S12 Tax=Pedosphaera parvula Ellin514 RepID=B9XFN5_9BACT
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
30S ribosomal protein S12
PLM4_5_b1_sep16_scaffold_3262_7
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4729..6561)
DNA (1833bp) protein (611aa)
Glycoside hydrolase family 3 domain protein bin=GWF2_Melioribacter_38_21 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
glycoside hydrolase family protein
Tax=CG_Ignavi_01
PLM4_5_b1_sep16_scaffold_3262_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(6759..8372)
DNA (1614bp) protein (538aa)
UspA domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XG76_9BACT
UspA domain protein {ECO:0000313|EMBL:EEF61238.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_3262_9
unknown

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comp(8419..8514)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 9 items

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