ggKbase home page

PLM4_5_b1_sep16_scaffold_3514

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_3514_1
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

2..175
DNA (174bp) protein (58aa)
TatD-related deoxyribonuclease Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZPD6_OPITP
TatD-related deoxyribonuclease
TatD-related deoxyribonuclease {ECO:0000313|EMBL:ACB73541.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_5_b1_sep16_scaffold_3514_2
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(213..1352)
DNA (1140bp) protein (380aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B434AA
hypothetical protein
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_5_b1_sep16_scaffold_3514_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1500..1784
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XGM9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61080.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_3514_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1798..2181)
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XGN0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61081.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_3514_5
unknown

Not on your lists

comp(2234..4117)
DNA (1884bp) protein (628aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_3514_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(4236..5126)
DNA (891bp) protein (297aa)
ABC transporter related-protein Tax=Pedosphaera parvula Ellin514 RepID=B9XLQ4_9BACT
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_5_b1_sep16_scaffold_3514_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5203..5616)
DNA (414bp) protein (138aa)
Transcriptional regulator, GntR family Tax=Pedosphaera parvula Ellin514 RepID=B9XLQ5_9BACT
ytrA; HTH-type transcriptional repressor YtrA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_5_b1_sep16_scaffold_3514_8
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

5621..6934
DNA (1314bp) protein (438aa)
Glycoside hydrolase family 2, sugar binding Tax=Roseiflexus sp. (strain RS-1) RepID=A5URZ7_ROSS1
glycoside hydrolase family protein
Glycoside hydrolase family 2, sugar binding {ECO:0000313|EMBL:ABQ89400.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM4_5_b1_sep16_scaffold_3514_9
unknown

Not on your lists

6924..7043
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 9 items

View Taxonomy