ggKbase home page

PLM4_5_b1_sep16_scaffold_3741

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_3741_1
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

535..1788
DNA (1254bp) protein (418aa)
oxidoreductase domain-containing protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
oxidoreductase domain-containing protein
Tax=RBG_16_Planctomycetes_64_12_curated
PLM4_5_b1_sep16_scaffold_3741_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1934..3034)
DNA (1101bp) protein (367aa)
Nitrate transporter, putative Tax=Pedosphaera parvula Ellin514 RepID=B9XJ74_9BACT
Nitrate transporter, putative {ECO:0000313|EMBL:EEF60112.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
nitrate transporter
PLM4_5_b1_sep16_scaffold_3741_3
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(3317..5086)
DNA (1770bp) protein (590aa)
hypothetical protein Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B47726
hypothetical protein
Tax=CG_Arma_01
PLM4_5_b1_sep16_scaffold_3741_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

5275..6894
DNA (1620bp) protein (540aa)
Beta-lactamase Tax=Chthoniobacter flavus Ellin428 RepID=B4DAT2_9BACT
Beta-lactamase {ECO:0000313|EMBL:EDY16492.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
beta-lactamase
PLM4_5_b1_sep16_scaffold_3741_5
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

6879..7313
DNA (435bp) protein (145aa)
Beta-lactamase bin=GWA2_Bacteroidetes_A19_40_15 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
hypothetical protein
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_5_b1_sep16_scaffold_3741_6
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(7310..8818)
DNA (1509bp) protein (503aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_49_21 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=GWF2_Lentisphaerae_49_21_curated
PLM4_5_b1_sep16_scaffold_3741_7
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

8894..9679
DNA (786bp) protein (262aa)
hypothetical protein Tax=Singulisphaera acidiphila RepID=UPI0002FAE2BF
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
PLM4_5_b1_sep16_scaffold_3741_8
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(9739..11667)
DNA (1929bp) protein (643aa)
Uncharacterized protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZX11_OPITP
signal peptide
Uncharacterized protein {ECO:0000313|EMBL:ACB75122.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_5_b1_sep16_scaffold_3741_9
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11729..12493)
DNA (765bp) protein (255aa)
Peptidase M48 Ste24p Tax=Caldithrix abyssi DSM 13497 RepID=H1XVP9_9BACT
peptidase M48, Ste24p
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM4_5_b1_sep16_scaffold_3741_10
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(12490..14844)
DNA (2355bp) protein (785aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XAP2_9BACT
Glutaminase A
Glutaminase A {ECO:0000313|EMBL:AIE86755.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Displaying 10 items

View Taxonomy