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PLM4_5_b1_sep16_scaffold_2139

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_2139_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3..3380)
DNA (3378bp) protein (1126aa)
Tetratricopeptide TPR_4 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ46_9BACT
Tetratricopeptide TPR_4 {ECO:0000313|EMBL:EEF60084.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_2139_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(3542..4807)
DNA (1266bp) protein (422aa)
Transcriptional regulator Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9W3_SINAD
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGA25660.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM4_5_b1_sep16_scaffold_2139_3
unknown

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4890..5252
DNA (363bp) protein (121aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2139_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5256..5600)
DNA (345bp) protein (115aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase Tax=Pedosphaera parvula Ellin514 RepID=B9XSV1_9BACT
PLM4_5_b1_sep16_scaffold_2139_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5981..6922)
DNA (942bp) protein (314aa)
ApbE family lipoprotein Tax=Pedosphaera parvula Ellin514 RepID=B9XF13_9BACT
ApbE family lipoprotein {ECO:0000313|EMBL:EEF61511.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Membrane-associated lipoprotein involved in thiamine biosynthesis
PLM4_5_b1_sep16_scaffold_2139_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(6996..8375)
DNA (1380bp) protein (460aa)
Oxidoreductase domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XF14_9BACT
Oxidoreductase domain protein {ECO:0000313|EMBL:EEF61512.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Predicted dehydrogenases and related proteins
PLM4_5_b1_sep16_scaffold_2139_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

9075..9413
DNA (339bp) protein (113aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XBF8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62843.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_2139_8
unknown

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9641..11386
DNA (1746bp) protein (582aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2139_9
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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11397..12059
DNA (663bp) protein (221aa)
Uncharacterized protein Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T3D4_THEA1
hypothetical protein
Tax=BJP_IG2157_Anaerolineales_55_23
PLM4_5_b1_sep16_scaffold_2139_10
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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12064..13080
DNA (1017bp) protein (339aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Mycobacterium colombiense genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM4_5_b1_sep16_scaffold_2139_11
unknown

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comp(13201..14703)
DNA (1503bp) protein (501aa)

This feature has no annotations

Displaying 11 items

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